Planococcus faecalis: AJGP001_11345
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Entry
AJGP001_11345 CDS
T04955
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pfae
Planococcus faecalis
Brite
KEGG Orthology (KO) [BR:
pfae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfae03032
]
AJGP001_11345
03400 DNA repair and recombination proteins [BR:
pfae03400
]
AJGP001_11345
Enzymes [BR:
pfae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AJGP001_11345
DNA replication proteins [BR:
pfae03032
]
Prokaryotic type
DNA Topoisomerases
AJGP001_11345
DNA repair and recombination proteins [BR:
pfae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AJGP001_11345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
DUF2996
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AQU79826
LinkDB
All DBs
Position
complement(2235024..2237093)
Genome browser
AA seq
689 aa
AA seq
DB search
MADFLVIVESPAKAKTIERYLGKKYKVRASLGHLRDLPRSQMGVDVENNYEPRYITIRGK
GPILQDLKKEAKKAKKVFLAADPDREGEAIAWHLATALGIDQTSDCRVVFNEITKDAIKE
SFKHPRKIDMDLVDAQQARRILDRLVGYSISPLLWKKVKKGLSAGRVQSVALRLVIDREN
EIKSFEPEEYWSITGQFEKAKKNFEAQFYGNTKEKMKLHNEADVKAVMSSMSGKNFTVNR
VVKKERKRNPSPSFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGISVGKEGITGLITYMR
TDSTRISDTAKKDTMDFIVENYGEEYVTQKAPAKQSAKSQDAHEAVRPTSVMRTPESMKS
ILSRDLYRLYKLIWDRFVASQMSSAVLDTVMAELQNGEAVFRANGSQVKFPGFMKLYIEG
TDDQKEEKDNILPEMAEGDIVKAVDVTPNQHFTQPPPRFTEARLVRALEELGIGRPSTYA
PTLDTIQKRGYVTLDAKRFIPTELGEIVHQLVLEFFPDILNIEFTAKMEHDLDTVEDGEI
EWRTIIDAFYQKFEKNVEVAENEMEKVQIKDEPAGEDCELCGSAMVYKLGRYGKFMACSN
FPECRNTKAIVKHIGVKCPTCKEGEIVERKSKKRRIFYGCERYPECEFVSWDKPIERPCP
KCNELLVEKKVKKGVQINCTSCDYKEEVQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcggattttttagtgattgttgagtcgcctgcaaaggctaagacgatcgaacggtat
ttgggtaagaaatataaagtccgtgcttcacttggacatttacgcgatttgccccggagt
caaatgggtgtagacgtggaaaacaattatgaacctcgatatattacgataagaggtaaa
ggaccaatcttacaagatcttaaaaaagaagcgaaaaaagcgaaaaaagtctttctcgcg
gctgaccccgacagagaaggagaagcaattgcatggcatttggcgacggcactcggtatt
gatcaaacttcagattgccgtgtcgtttttaatgaaattaccaaagatgcgattaaggaa
tcatttaagcatccgcgtaaaattgatatggacttagtcgatgcgcaacaagcacgacgg
atattagatcgacttgtcggctacagcatcagcccattactttggaaaaaagtaaaaaaa
ggcttatcagctggacgcgtacaatctgtcgcgttgcgtttagttatcgatcgagaaaat
gaaatcaagagcttcgaaccagaggaatactggtcaatcactggacagttcgaaaaagcg
aagaaaaacttcgaagcgcaattttatggcaacacaaaagaaaaaatgaaattgcataat
gaggctgacgttaaagcggtcatgtcttccatgtcaggaaaaaactttaccgtaaatcgc
gtagtgaaaaaagaaagaaaaagaaacccttcgccttcttttacaacttcttcacttcag
caagaagctgctcgtaaattaaacttccgagctaaaaagaccatgatgcttgcacaacag
ctgtatgaaggtatttcagtagggaaagaaggcatcacgggtttgattacgtatatgaga
acggactctacccgaatctcggatacggcaaaaaaagacacaatggactttatcgtcgag
aactacggcgaggaatacgtaacacaaaaagcgccagctaagcagtcagcaaaatcacaa
gacgcccatgaagcggttcgaccgacaagcgtgatgagaacgccagaatcgatgaagagc
attttatcacgtgatctttaccgtctatataaattgatttgggatcgatttgtagcgagc
caaatgtcatcggctgttctagatacagttatggcagagttgcaaaacggtgaagcagtg
ttccgtgcaaatggttcacaggttaagtttcccggttttatgaagctttatattgaaggc
accgatgaccaaaaagaagaaaaagataatatactgccggaaatggctgaaggcgatatc
gtgaaagcggtcgacgttacaccaaatcagcattttacgcagccacctccgcgttttaca
gaggctcgcttagtacgagcacttgaagaactagggattggacgtccatcaacttatgca
ccaactttggataccattcaaaaacgcggctatgttacattagacgctaaacgctttatt
ccaacggagttaggtgaaattgttcatcagctagtgctcgagtttttcccggacatttta
aatatcgaatttacggctaaaatggagcatgatttggatacagtggaagatggcgaaatt
gaatggcgcaccattatcgatgctttttaccagaaattcgaaaaaaatgtcgaagtggca
gaaaatgaaatggaaaaagtacagattaaagatgaaccagctggtgaagattgcgaactg
tgtggttcggcaatggtttataaattgggacgttatggtaagttcatggcttgtagcaat
ttccctgaatgccgaaatacaaaagccatcgtcaagcatattggcgtgaaatgcccaaca
tgtaaagaaggcgaaattgttgaaagaaaaagtaagaagcgccggatattctacggctgc
gaacgttatccagaatgtgaattcgtatcatgggataaaccaattgaacgcccatgtccg
aaatgtaacgagttgctggtagagaaaaaagtgaaaaaaggcgttcaaatcaattgcaca
agctgtgattataaagaagaagttcaataa
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