Parabacteroides faecis: NXY11_02725
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Entry
NXY11_02725 CDS
T08643
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pfai
Parabacteroides faecis
Pathway
pfai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NXY11_02725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfai03400
]
NXY11_02725
Enzymes [BR:
pfai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NXY11_02725
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NXY11_02725
DNA repair and recombination proteins [BR:
pfai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NXY11_02725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Zn_ribbon_TFIIB
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
UVQ47180
LinkDB
All DBs
Position
complement(637804..638649)
Genome browser
AA seq
281 aa
AA seq
DB search
MIEAPEALYISEQMNQTIKGKRITFVSAGYTPHKFAWFYGDPANYSGMLTGKIIGEAHAY
GGLIEIDIEDVRLLFGDGMNIRYYAPGEKIPEKHQLLIAFEDESCIMGSVRMYGAVMCFP
DGAFDCSFSSYREGARTKPQVLSEAFDKTYFLSLINSEEKQKKTAKAFLATEQTIPGLGN
GVLQDILFEARIHPKTRINILSEEQKDTLFHCTKATLQEIYQAGGRNSETDLLGNKGRYI
PILSKDTTGKPCPVCGEDIRKESYMGGSIYYCFECQKLTQP
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagcaccggaagccttgtacatctccgagcagatgaatcaaacgattaaaggg
aaaagaattacatttgtcagcgcaggatatacacctcataagtttgcatggttctatgga
gatccggctaattattcggggatgcttaccggtaagataattggggaagcccatgcttat
gggggtctgatcgagatagatatagaagatgtgcgtttattattcggagacggaatgaat
atccggtactacgctcccggtgaaaagataccggaaaaacaccagttgctcattgctttc
gaagacgagagttgtatcatgggatccgtccggatgtacggggcagtcatgtgttttcct
gacggtgctttcgattgcagcttcagctcctatcgtgaaggggcacgtactaaaccccag
gtgctttcggaagctttcgacaaaacctattttctgagcctgataaacagtgaggagaaa
caaaagaaaacggcaaaggctttccttgcgaccgagcaaacaattccgggattaggtaac
ggcgtattacaggacatcctgttcgaagcacgtatccatcctaagactcgtatcaacata
ttatctgaagaacagaaagatacgttgtttcattgcactaaagcgacacttcaggaaatc
tatcaggcaggcggacgtaattcggaaacagacctgctcggaaataaaggccgctatatc
cccatattatccaaagatacaaccggcaagccttgcccggtttgcggagaagatatacgc
aaagagagttatatgggaggaagtatctattattgctttgaatgtcagaagttgactcaa
ccgtaa
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