Parabacteroides faecis: NXY11_02930
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Entry
NXY11_02930 CDS
T08643
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
pfai
Parabacteroides faecis
Pathway
pfai02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pfai00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NXY11_02930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfai03021
]
NXY11_02930
Transcription machinery [BR:
pfai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NXY11_02930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
HTH_20
dCache_3
KORA
Motif
Other DBs
NCBI-ProteinID:
UVQ47218
LinkDB
All DBs
Position
682351..683211
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AA seq
286 aa
AA seq
DB search
MRQLKITKSITNRESASLDKYLQEIGREDLITVEEEVELAQAIKRGDRRALEKLTRANLR
FVVSVAKQYQNQGLSLPDLINEGNLGLIKAAEKFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNQVGSLNKISKAFSKFEQENERRPSPEELADELDIPVDKISDTLKVSGRHI
SVDAPFVEGEDNSLLDVLVNDDAPIADRSLMNESLAKEIDRALATLTERECEIIKMFFGI
GCQEMTLEEIGDKFGLTRERVRQIKEKAIRRLRQGTRSKLLKSYLG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagacagttaaagatcacaaagtccattaccaatcgcgaaagtgcttcgcttgataag
tatcttcaggaaataggccgtgaagatcttattacagtggaagaggaagtagaattggca
caggcaattaaaagaggcgaccggagagcattggagaaattaaccagagctaacctgcgt
ttcgtcgtttctgtagctaagcaatatcaaaaccagggattaagtttacctgaccttatt
aacgaaggtaacctggggttgattaaagcggctgagaaatttgatgaaaccagagggttt
aagttcatttcgtatgctgtatggtggattcgtcagtctattttgcaggctttggcagaa
cagtcgagaattgttcgtcttccgttgaatcaggtaggttcgctgaataagatcagtaaa
gccttctctaaatttgaacaggaaaatgaacgtagaccttctcccgaagaattggcagac
gaactggatattcctgtagataaaatttcagatactctaaaggtgtccggaaggcatatc
tctgtggatgctccgtttgtagaaggcgaagacaacagtcttttggacgtgcttgtgaac
gatgacgctcctatcgctgaccgatcgttgatgaacgagtcattggcaaaagaaattgac
cgagcacttgctacactaaccgaaagagaatgtgaaataatcaaaatgtttttcggtatt
ggctgtcaagaaatgacattggaagagattggcgacaaatttggcctcactagagagcgc
gtccgccagatcaaggaaaaagcaatcagaagattaagacaaggaacacgtagcaagctc
ctcaaatcgtatttaggttga
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