Parabacteroides faecis: NXY11_08020
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Entry
NXY11_08020 CDS
T08643
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pfai
Parabacteroides faecis
Brite
KEGG Orthology (KO) [BR:
pfai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfai03009
]
NXY11_08020 (rimO)
Enzymes [BR:
pfai01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NXY11_08020 (rimO)
Ribosome biogenesis [BR:
pfai03009
]
Prokaryotic type
ribosomal protein modification factors
NXY11_08020 (rimO)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UVQ48159
LinkDB
All DBs
Position
complement(1892744..1894042)
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AA seq
432 aa
AA seq
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MRKNKVDIITLGCSKNLVDSEQLMRQFVVNGYTVEHDPHKINGEIVVVNTCGFIGDAQEE
SINMILELGEAKKKGKIGQLYVMGCLTERFLEEMKQELPEVDHFYGKFNWKQLLSDIGKS
YYRELASDRVLTTPKHYAFLKIAEGCNRTCSYCAIPISTGHYQSLPMEQIEEEVRLLVAQ
GVKEFQVIAQDLTYYGLDIYKRYALPELIERISDIPGVEWIRLHYGYPSHFPYDLLRVMR
ERDNVCKYLDIALQHISDHMLKMMRRNITKEETYALLERIRKEVPGIHLRTTLMVGHPGE
TEQDFEELVEFVKKARFERMGAFAYSHEEGTYSFKNYTDDVPEEVKQERLDYLMRIQERI
SAEINEEKVGRTFKIMLDREDEDYYVGRTEFDSPEVDPEILVFKEQSLNPGEFYNVNIEE
SQAFELYGKVLL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaaataaagtagatataatcacgcttggttgttcgaagaatctggtcgattcg
gaacagctgatgcgccagtttgtagttaacggttatacggtagaacatgatccccataaa
ataaacggagagattgtcgttgtaaacacctgcggttttatcggagatgcccaggaggaa
tcgatcaatatgattctggaattaggggaagccaagaagaaaggaaagatcgggcaatta
tacgttatgggatgcctcacggagcgtttcctggaagaaatgaagcaggaactacccgaa
gtagatcatttttacggtaagttcaattggaaacagctcctgtccgatatcggtaaatct
tactatcgcgaactggcttccgaccgtgtgctgacaaccccgaaacactatgcctttctg
aagatagcggaaggatgcaaccgcacctgttcgtactgcgcgatacctatcagtaccggg
cattatcagtctcttccgatggagcagatagaagaagaagtgcgtctgctcgttgcccag
ggggtaaaagagtttcaggtgatcgcacaggatttgacctattacggactggatatatat
aagaggtacgcgttaccggaattgatcgaacgtatttctgatattcccggtgtggaatgg
atccgcttacactatggttatccgtctcatttcccctatgatctgttacgggtaatgcgt
gaacgtgataatgtctgtaaatatctggatatcgctttgcagcatatcagtgatcatatg
ttgaaaatgatgcgccgcaatataaccaaggaagaaacatacgccttactggaacgtatt
cgcaaagaggttccgggcattcatctccggacaacgctgatggtcggtcatccgggggag
acggagcaggattttgaagagttggtcgaatttgtcaaaaaagcacgctttgagcgtatg
ggggcatttgcctacagtcacgaagaaggcacttattcattcaagaattatacggatgat
gtccctgaagaggtaaaacaggagcgtttggattatcttatgcggatacaggaacgtatc
tctgccgagataaacgaagaaaaggtaggccggacttttaaaataatgctcgatcgtgag
gatgaagattattatgtcggacgtaccgagtttgactcacctgaggttgatccggaaatc
cttgtttttaaagagcaatcattgaatccgggagaattttataacgtaaatatcgaagaa
tcacaggcttttgagctatacggaaaagtgttgctttga
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