Parabacteroides faecis: NXY11_10240
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Entry
NXY11_10240 CDS
T08643
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pfai
Parabacteroides faecis
Pathway
pfai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NXY11_10240 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfai03400
]
NXY11_10240 (nfo)
Enzymes [BR:
pfai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
NXY11_10240 (nfo)
DNA repair and recombination proteins [BR:
pfai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NXY11_10240 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
HpaB_N
Motif
Other DBs
NCBI-ProteinID:
UVQ48573
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All DBs
Position
complement(2445143..2445979)
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AA seq
278 aa
AA seq
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MKYIGAHVSASGGVENAPLNANAIGAKAFALFTRNQRQWKSSPLTKKSISLFKERCEEFG
YEAKHILPHDSYLINLGHPDPDGLQKSRDAFLDEMQRCEQLGLDRLNFHPGSHLNEISVD
DCLARIAESINRTLEQTVGVCAVIENTAGQGTNLGYTFEQIAAIIDRVDDKSRVGVCIDT
AHTLAAGYDIKTEQGFTETFRHFDEVIGFSYLRGMHINDSKKDLATRVDRHDSIGKGVMG
MTTFQMLMKDTRFDDIPLILETPDESIWAEEISYLYTL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacattggagctcatgtaagtgcgtcgggtggggttgagaatgctccgctgaac
gccaatgctatcggggcgaaagcttttgccctctttacccgaaaccaacgtcaatggaaa
tcttctccgttgacgaagaaaagtatctccttatttaaagaacgttgtgaggaattcggc
tacgaagccaaacatattttacctcacgacagttatctgattaatctgggacatccggac
ccggacggtctgcaaaagtcacgcgatgcctttctggatgaaatgcagcgttgcgaacaa
ctgggactggaccggctgaactttcatccgggaagccatctgaatgagatttcggtagac
gattgcctggcacgtattgccgaatcgatcaatcggacactggagcagactgtgggagta
tgtgccgttatagagaatacggccgggcagggtacgaatttgggatatactttcgagcaa
atcgcggctatcatcgaccgggtggacgacaaatcccgtgtaggtgtttgtatcgatacc
gcccatacgctggctgccggttatgatatcaaaacggaacagggctttacggagacattc
cgccatttcgatgaagtgatcggtttttcatacctgcgtggaatgcatatcaacgattcc
aagaaagacctggcaacccgtgtagacaggcatgacagtatcgggaaaggcgtgatggga
atgacgacttttcagatgttgatgaaggatacccgttttgacgatatacctctgatattg
gagacgccggacgaatcgatctgggcggaggagatcagctatctgtacactttataa
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