Parabacteroides faecis: NXY11_12290
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Entry
NXY11_12290 CDS
T08643
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfai
Parabacteroides faecis
Pathway
pfai02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfai00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NXY11_12290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfai03021
]
NXY11_12290
Transcription machinery [BR:
pfai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NXY11_12290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_23
HTH_38
PhyR_sigma-like
HTH_10
HTH_40
HTH_28
HTH_11
PF0610-like_N
Xre-like-HTH
HTH_5
HTH_24
HTH_17
DUF1492
Motif
Other DBs
NCBI-ProteinID:
UVQ48957
LinkDB
All DBs
Position
complement(2946298..2946846)
Genome browser
AA seq
182 aa
AA seq
DB search
MEKENEYAKALSEGDSGAFEWLFLHYQPKLIAFFAGFVHDDEVARDMAQDIFFSLWTNRV
KLSAVRSFSSYLYQMARNALFNYYDHSLVCEKYDAELLFRPLVTDDTEELLFAQELKGLI
DLKVEQMPPQRRQIFRMSRVEGLNNDEIAAHLNISKRTVENHLTAALSDLRRMLKIVLLL
FY
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggagaatgaatatgctaaagcattgagtgaaggagattcgggagcttttgaa
tggctgtttttgcattatcaaccaaagttgattgctttttttgccggctttgtccatgat
gatgaggtagcacgcgatatggcccaggatatcttctttagtttatggacaaatcgagtt
aagctgtcagcagtccgttcgttttcgtcttacctttatcagatggcgcgtaatgccttg
ttcaattattatgaccattcgcttgtttgtgagaaatatgatgcggagctactcttccgt
ccgttggtgacagatgatacggaagaattgctttttgcacaggaattaaagggtttgatc
gacctgaaggtggagcagatgccaccccagcgtcgacagatatttcgtatgagtcgtgtg
gaaggtcttaataacgatgaaattgctgctcatttgaatatcagtaaacggacagtagag
aatcatcttaccgctgcattgtcggaccttcgccggatgctaaaaatagttttgttgctt
ttttattga
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