Parabacteroides faecis: NXY11_13395
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Entry
NXY11_13395 CDS
T08643
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pfai
Parabacteroides faecis
Brite
KEGG Orthology (KO) [BR:
pfai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfai03400
]
NXY11_13395
DNA repair and recombination proteins [BR:
pfai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NXY11_13395
Archaeal homologous recombinant proteins
NXY11_13395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
ABC_tran
RsgA_GTPase
SLATT_6
AAA_21
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UVQ49157
LinkDB
All DBs
Position
complement(3205124..3208096)
Genome browser
AA seq
990 aa
AA seq
DB search
MKVLAIRGRNLASLEGEFEVDFTVEPLLSAGIFAISGPTGAGKSTILDAMCLALFARTPR
TDQAKENNVKLRDVNEEVLPQSDPRFLLRRGTASGYAEVDFLALNGHRYRSRWSVGRARD
KESGRLQSPRVALYNIDQEKEEQGTRSELQSRVVELIGLTFEQFTRSVLLAQNDFSTFLK
AEQGEKASLLEKLTGTELYSSVSRLIFEKNAVAKEAYDKIQARIQGIELLTEEAEQELQT
RLKESEAALSDLEKSKVEQQALQEGVKATGQQIATRQVQQKEAAGKLLRATELLNTARKE
YEQGIQDEQRSDADFKALQQELQQARRLDVRLDEAIRSVKDTETRLRDALQRKKEGEDKL
KAARTRQEHSMAEITRLTDWRKRYERKESIAEQLSALLLHLDTASGARQTIEKSTKTIES
IKQTASRLVVQLETVQKTAGNKQVALRKTEEAIGKQEQELKSQDMEPLDKQIESVRVERE
NLLIEQARQTASGDIMELRIKLQEGSPCPVCGSLHHPAVTHAAVSEMPKLIAALTLQLQQ
LTARKAAYGAGEKQLNQLRQQLLQLHKELTEAEQSRTDILGQQKLAETQITREESICAES
KETLNKSLSAANRLFGNDEWQKAWLQDPDSFRETLTTFARGWHENTEKLQQLQREQSAQK
AECESYASFLPSLIRETEEATLRHEKNRTELSALQAERSKLLSGKPADQVEQEYNLRKEE
LKERLKRLQTVQTEQSGIADQLKGISDQIARDLEKASEDLLLRQKALSDWSESWNEKHGG
ESLDALLARVTQEKNEYAFRLRSNAENKQKIASQQKELEACRVQSERWAKLNDLAGSADG
AKFRRIAQGYTLDVLLNYANVQLRDLSRRYRLERVPETLALQVIDRDMCDEIRTVHSLSG
GESFLVSLALALGLSSLSSNRMKVESLFIDEGFGSLDADTLRIAMDALESLRTQGRKIGV
ISHVQEMTERIPVQIRVNRAGNGRSYLEVV
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtattagcgataaggggccgtaacctggcctcgctggaaggtgaatttgaagtc
gattttactgtcgaacctttgttgtctgccgggatctttgccatttcgggaccgacggga
gctggaaaatctaccatattggatgccatgtgcctcgctttgtttgcccgtacgccacgt
acggatcaggcaaaagagaacaacgtgaaactacgggatgtgaatgaggaagtacttccg
caaagcgacccccgctttttgttgcggagagggacggcttccggttatgccgaagtcgat
ttcctggcgttgaacggacatcgttaccgttcgcgctggtcggttggacgtgctcgtgac
aaagagagcggacgtttgcaaagtccccgtgttgccttatataatatagatcaggaaaag
gaggagcaggggacccgctcggaattacaatcgcgtgtggttgaactgatcggtttgacg
tttgaacagtttacccgctctgtcctgttggcacagaatgatttttctactttcctgaaa
gcggaacagggggaaaaggcttcattgctcgaaaagttgactggtaccgaactttactct
tcggtctcccgtctgatctttgaaaagaatgctgtcgccaaagaggcttatgataagata
caagcccgtatccagggcatcgagctgctgacggaagaagcggaacaggaactgcaaaca
cgcctgaaagaatcagaagcagccttatcggatttggagaagtcgaaagtcgaacaacag
gcgctacaggaaggggttaaggccaccgggcaacagatcgctacccgtcaggtacaacaa
aaggaggctgccggtaaactgctccgggcaacggaacttctgaatactgcccgtaaagaa
tatgaacaaggtattcaggatgaacagcgttcggatgctgacttcaaagctttgcagcag
gagttgcaacaggctcgcaggttggatgtccggttagatgaagctatccgttccgtcaaa
gatacggagactcgtcttcgggatgcgcttcaacggaaaaaggaaggtgaggataaattg
aaagccgcccggaccagacaggagcatagcatggcagagatcacccgtttgaccgactgg
cggaaacgatatgagcgtaaagagagtatcgcggaacaactttctgctttattactgcat
ctggatacagcttccggcgcacggcaaaccattgagaaatcgacaaagacgatagagagc
attaaacaaacggcctcccgcctggttgtccagttggagacagttcagaagacagccgga
aataagcaggtagctctccggaaaacggaggaagctatcggcaaacaggaacaagaactg
aaatcgcaggatatggagcccctcgataaacagatagagtcggttcgtgtggagcgcgaa
aatctgttgatcgaacaggcacggcaaacggccagcggcgatatcatggagttacggata
aaactgcaggaaggtagtccctgtccggtatgcggaagcctgcatcatcctgctgtgaca
catgctgccgtatctgaaatgccgaagttgatcgctgccttgactttgcaacttcagcag
ttgacggcccgtaaagcggcttatggagcaggtgaaaagcagctgaatcaattacgtcag
cagcttttgcaactccataaggaactgaccgaggccgaacaatcccgtacggatattctg
ggacaacagaaactggctgaaacccagatcacccgcgaagagtccatctgtgcggagagc
aaggaaacactcaataaatccctctctgccgcaaaccggcttttcgggaatgatgaatgg
cagaaagcatggttacaggacccggattctttccgggaaacattaacgacttttgctcgc
gggtggcatgaaaatacggagaagttacagcaactgcaacgggagcaaagcgctcagaaa
gccgagtgcgaatcgtatgcttcttttcttccttcattgatcagggagacggaggaggct
accttacggcatgagaaaaaccgaacggagttgtccgcactacaggcggaacgttcaaaa
ctcttgtccggtaaacctgccgatcaggttgaacaggagtataaccttcgtaaagaagaa
ttaaaagaacgtttgaaacgtctgcaaaccgtccagactgaacaatcgggcattgccgat
cagttgaaaggaatttccgaccagatcgcccgtgatctggaaaaagcttcggaggatttg
ctgcttcgtcagaaagcgttgtccgactggtccgaatcctggaatgagaaacatggcggg
gagtccctggatgctttattggctcgtgtcacccaggagaaaaatgagtatgctttccgt
ctccgctccaatgcagagaacaaacaaaaaatagccagtcagcaaaaagaactggaggca
tgccgtgtacagagtgaacgttgggcgaaactgaatgacctggcgggttctgcggatgga
gccaagttccgccgtattgcgcagggttatacactggatgtcttgcttaattatgccaat
gtccagttacgtgacctgagccgtcggtatcgtttggagagggtacccgaaacgttggcc
ttgcaggtgatcgaccgtgatatgtgcgatgaaatacgtacggtacatagtctgtcaggc
ggggagtcatttctggtttcgctggcgctggcattggggttatcttctttatcttcaaac
cggatgaaggtagaaagtctctttatcgatgaaggtttcggatctttggatgccgatacg
ttacgtattgctatggatgcattggaaagcctgcgtacccagggtcgtaaaatcggtgtg
atttcacatgtgcaggaaatgacggagcgtattccggtacagatccgcgtgaatcgggca
gggaatggaaggagttatctggaagtcgtatag
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