Parabacteroides faecis: NXY11_14025
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Entry
NXY11_14025 CDS
T08643
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pfai
Parabacteroides faecis
Pathway
pfai00550
Peptidoglycan biosynthesis
pfai01100
Metabolic pathways
pfai01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pfai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NXY11_14025 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NXY11_14025 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfai01011
]
NXY11_14025 (mrdA)
Enzymes [BR:
pfai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NXY11_14025 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfai01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NXY11_14025 (mrdA)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UVQ49275
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All DBs
Position
complement(3355200..3357077)
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AA seq
625 aa
AA seq
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METNTKYTLENRRYVIISAVVLLVLIFIIRLFYLQVVENDYKAWADSNAFLKKTLLPSRG
MIYDRNGELLVYNQPAYEVMLIMREVQPFDTLDFCNILGITKELFDKRISEIKNRQLNPG
YSSYVPQVFMNNLSAQECGVLQEKLYKFPGFYIQNRTIRQYEYPYAAHILGNIGQVSRKD
IKEDDYYVQGDFSGRAGVERSYEKELRGVKGVEILLRDVHGRIKGKYDEGNSDIAPVSGK
NLKLSIDINLQAYGEKLMKNKVGSIVMIEPETGEVLCMVSSPNYDPSLLVGRQRGKNHKM
LEDDPQTPLVDRSITGFYPPGSTFKPTQGLIFLQEGVITPETMYTCAHGYTYSPKRKPAC
HGHYSPLSLVPALATSCNSYFCWGLHDMLDSRRRYPTIQDAFEVWKNHLVSMGYGYPLGI
DLPGEKRGFIPNSKFYDKFYRRWTSTTIISIAIGQGEVTATPLQICNLAATIANRGYFIT
PHVVKEVQDTPLDTLYTKKRYPTVDAKYYDVVAEGMRNAVLGGTCWAAAIPGIEVCGKTG
TAENPHGKDHSAFIGFAPYKNPKVAICVYVQNGGFGAVFGVPIGKLMMELYLKGEISPED
KALEERIVNSVVTEDRIYSLLDRGL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
gtggagactaatacaaagtatacacttgagaacaggcgttatgtaataatcagtgccgtg
gttctgttggttctcatctttatcattcgtttgttctacctgcaggtggtcgagaacgat
tataaagcgtgggcggatagtaatgcgttcctgaaaaagactttactgccttcgcgtggg
atgatttatgaccgtaacggcgaattgcttgtttataaccagccggcttatgaagtaatg
cttatcatgcgtgaggtccagccgttcgatacgctggatttctgtaatatactcggcata
accaaagaactgtttgacaagaggatttctgaaataaaaaaccgtcagctgaatccgggg
tattcgtcgtatgtcccgcaggtgtttatgaacaatctttctgcgcaagagtgcggggtg
ttgcaggagaagctctataaattccccggattttatatccagaaccgtacgatccggcag
tatgagtatccttatgccgcccatattctgggtaatatcggtcaggtgagccggaaagat
attaaagaagatgattattatgtgcagggggatttctccggtcgtgcaggtgttgagcgt
tcatacgagaaagaactgcgtggtgtaaaaggggtggaaattcttttacgggatgtacac
ggccgcattaaaggcaagtatgatgaaggtaacagtgatattgctccggtgtcaggaaag
aacctgaagctttccattgatataaatttgcaggcttacggagagaaactgatgaaaaat
aaagtcggtagtatcgtaatgatagagcctgagacaggtgaagtgctttgtatggtctct
tcaccgaattacgatccgagtttattggtaggacgccaacggggaaagaatcataagatg
ttggaggatgaccctcaaacaccgcttgtagaccgttcaataacgggattttatcctccc
ggatctacctttaaacctactcagggattgatttttttacaggaaggggttattactcct
gaaactatgtacacttgtgcacatggatatacttattcgcctaaacgaaagccggcttgt
cacgggcactattcacctttgagcctggtcccggctttggcaacgtcttgtaactcttat
ttttgttggggattacatgatatgttggatagccgccgccggtatccgactatccaggat
gcttttgaagtctggaagaatcacttggtatcgatgggatatggttatccgttaggtatc
gatttacccggcgagaagagaggttttatcccgaatagtaaattttatgataaattttac
cggcgctggacttctactacgatcatttctattgcaattggtcagggcgaagtaactgca
acgccgttgcagatatgtaatctggcggcaacgatcgctaaccggggatattttattact
ccgcatgttgtaaaggaagtacaggatacgcctctggatactctgtatacaaagaagcgt
tatccgactgtagatgcaaaatattatgatgtcgtagcagaaggtatgcgtaatgcggta
cttggcggtacatgctgggctgcggcaataccgggaattgaagtttgcggtaaaaccggt
acggctgagaaccctcatggaaaggatcactctgcgtttattggttttgctccgtataag
aatcctaaagtggctatctgtgtatatgtccagaacggtggattcggggctgtgtttgga
gttcctatcggaaaactgatgatggaactttatctgaaaggtgagatatctccggaagat
aaagcattggaagaaagaatagtgaattcagttgttactgaagatcgtatttattcattg
ttggatcgtggtttatag
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