Parabacteroides faecis: NXY11_19735
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Entry
NXY11_19735 CDS
T08643
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pfai
Parabacteroides faecis
Brite
KEGG Orthology (KO) [BR:
pfai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfai02000
]
NXY11_19735
Transporters [BR:
pfai02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NXY11_19735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_6
TPR_2
TPR_1
TPR_8
TPR_14
TPR_19
TPR_17
Motif
Other DBs
NCBI-ProteinID:
UVQ45378
LinkDB
All DBs
Position
complement(4895129..4896862)
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AA seq
577 aa
AA seq
DB search
MKKILIYISILLTSATFNGCYDLNTYPGDKVSENLFYQTEEHAKQGLMGIYGMLRDNHAY
GYQFLFDHLADIAYGYDYYMMYLGTYSDRSAEIQSKWQTMYDGIQRANSYLRVIPTMDVL
TEEQKKEYMAEARFLRGMFYFTLLDLYGGVPYYDETTNLNVEYVGLKKPRSSAEEIRVHI
ISDLNEAVAYLPVRHNDSDYGRATKGAAYALRGKVYLYNKEWQNAIADFEEIVNNKSNNY
GYGLDTDYAHIFKLYNGDKSSEMIFSVQNKSGVGTEYGMAMQALMGTRSAFGSCWNNTVP
STQLADMYELKDGRPFSWNDVFPGYNEATPDQRKELFSVEMDASGTVIGLRDVDTAQILN
VYKSRDPRMMATLIVPYSIYKGCIGKTTPRDMLFAMDHNVQGNENQGTIRNNKGWISYLY
RKFVVEYDLGGAISDRLHTPFEFPLIRYADVLLMLAEAYNENNQLDKAVTEFNKVRARVD
MPGLNSGPAWMLVTSKEQMAERIRKERAVEFAGEGLRFSDLRRWGWEIASKAMSEVDAIN
IYGEFIYTHKFSERDMLWPIPGVEIERNEALKQNPGW
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatactgatatatatttctattttattgacatctgccacattcaacggatgt
tatgatcttaatacttatcccggtgataaagtaagtgagaaccttttctaccaaacggaa
gaacatgcgaaacaaggattgatgggaatttatggcatgttgcgggataatcacgcctac
ggttaccagtttttattcgatcacctggctgatattgcttatggatatgactattatatg
atgtatctgggtacttattctgatcgttcagcagaaattcaatctaaatggcaaacgatg
tatgatgggattcagagagctaatagctaccttcgggtcataccgactatggatgttctt
accgaggaacaaaaaaaggagtatatggctgaagccagattcctgcggggaatgttttat
tttactctgttggacttatacggcggtgttccttactatgatgaaacgacgaatctgaat
gtggaatacgttggcttgaagaaacccagaagctccgcggaagagatccgtgtacatatc
atcagtgacttgaatgaggctgtcgcttatcttccggtcaggcataatgattctgattat
ggtcgtgcgacgaaaggggcagcctatgctttgcgtggaaaagtttatctttataataaa
gaatggcagaatgctattgcggattttgaagagattgtcaataacaagtctaacaattat
ggatatggcctagacactgattatgctcatatatttaaactttataatggagataagagt
tctgagatgatcttttctgtacagaataaaagtggtgtcggaacagagtatggtatggct
atgcaagcattgatggggacacgcagtgcgtttggtagttgttggaacaatactgttcct
tccacccaattggcagatatgtatgaactcaaagatggccgtcctttcagttggaatgat
gtttttcccggatacaatgaagctactccggatcagcgtaaagaattgtttagtgtagag
atggatgcgtcagggactgttattggattgagagatgtagatacagcgcaaatattgaat
gtatataaaagcagggatcctcgtatgatggctactttgattgtcccttattctatttat
aaaggttgtatcggaaagacgactccacgggatatgctgtttgcgatggaccataatgtg
caaggaaatgaaaatcagggaaccatacgaaataataaaggctggatatcttatttgtat
cgcaaatttgtagttgaatatgatcttgggggagctattagtgaccgtttacacactcct
tttgagtttcctctgattcgttatgcggatgtattgttgatgttggcggaagcctataat
gaaaataaccaattggataaagcggttaccgaattcaataaggtaagagccagagtggat
atgcccggattaaactctggtcctgcctggatgcttgttacatccaaagagcagatggct
gaacgtatacgaaaagaacgtgctgttgagtttgcgggagaaggattacgtttcagtgat
ttgcgccgttggggatgggaaatagcaagcaaggctatgagtgaggtagatgcaatcaat
atttatggtgagtttatctatactcataaattttccgaacgggatatgctttggcctata
cctggtgtggagatagagcgcaacgaagcgttgaagcagaatccgggatggtaa
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