Parabacteroides faecis: NXY11_20535
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Entry
NXY11_20535 CDS
T08643
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfai
Parabacteroides faecis
Pathway
pfai02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfai00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NXY11_20535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfai03021
]
NXY11_20535
Transcription machinery [BR:
pfai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NXY11_20535
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_40
LPD39
HTH_10
HTH_17
HTH_23
Motif
Other DBs
NCBI-ProteinID:
UVQ45526
LinkDB
All DBs
Position
5127637..5128338
Genome browser
AA seq
233 aa
AA seq
DB search
MCYTDITNMLQLLKTPLLLEQHREKKVIVLRVFLFNYDYTYKEVNCQLLRDHKEDIAEWI
CEMALTDSQKAFKSLYLTYFQRMMRFTNLYVSSVVEAEEIVSDTFLAVWNNRKSLLKITN
FDAYIYSIARHKAISYYRTIHMEQIELNEISIDLFTHTETTPEDDLISKESLNQLNKAID
ALPAKCKAAFKLIREDKLKYKEVAAILDISVKTLEAHIATAVKKLRESLKQEK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgtgttacacggatattacaaacatgttacaattgttaaaaacgcccttgttattagaa
caacacagagaaaagaaagttatcgtactaagggtttttcttttcaattacgactatact
tataaagaagttaattgtcaattattgcgcgaccacaaagaagacatagcagaatggatc
tgtgaaatggcactgaccgattcacagaaagcctttaaatcgttatacctgacttacttt
caaaggatgatgcgatttactaatctgtatgtctcgtccgttgtggaagccgaagaaata
gtatcggatacattcctggctgtatggaacaaccggaaatccctattaaaaataaccaac
ttcgatgcttacatttattctatagccaggcacaaagcgatcagctattaccgtaccata
cacatggaacaaatagaactgaatgaaatttcaatagaccttttcacacatacggaaaca
acgccggaagatgacctcatctctaaagaaagcctcaatcaactgaataaggcaatcgat
gcccttcctgccaaatgcaaagcggccttcaaactgattcgtgaagacaagcttaaatac
aaagaagtagcagccatattagacatatccgtaaaaacactcgaagctcatatcgctacc
gcagtaaaaaaattacgtgaatcgctcaaacaggaaaaatag
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