Parabacteroides faecis: NXY11_21840
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Entry
NXY11_21840 CDS
T08643
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pfai
Parabacteroides faecis
Pathway
pfai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NXY11_21840 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfai03400
]
NXY11_21840 (mutS)
DNA repair and recombination proteins [BR:
pfai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NXY11_21840 (mutS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
AAA_27
ABC_tran
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UVQ45773
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Position
5504259..5506907
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AA seq
882 aa
AA seq
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MAKIVETPLMKQYFDIKAKHPDAVLLFRVGDFYEMYGEDAVVGAEILGIVQTKKANGPGQ
FIEMAGFPHHALDTYLPKLVRAGKRVAICDQLEDPKMTKKLVKRGVTELVTPGVSINDNI
LNHKENNFLAAVHFAKDVCGVAFLDISTGEFLTAEGTIDYIDKLLNNFSPKEVLVERNNR
KKFEEVFGPRFFTFEMEDWVFSADAANDRLLKHFETKNLKGFGVEHLKLGVVASGAILYY
LDQTQHTHISHITALSRIEEDRYVRLDKFTVRSLELVGTMNDEGTSLLDVIDKTVSPMGS
RMLRRWVLFPLKDVKPIRDRQNVVDYFFRHPEVKDILDEQIEQIGDLERIISKVAVGRVS
PREVVQLKVALRAIEPIKEACMASDEPSLSRIGEQLNACTEIRDRIEKEINNDPPSLLNK
GGVIAKGVNAELDELRAIAYSGKDYLIQVQQRESEKTGIPSLKIAFNNVFGYYIEVRNAH
KDKVPAEWIRKQTLVNAERYITEELKEYEEKILGAEEKILSLEGRLFTELVTCLAEFIPP
IQVDANLIGRLDCLLSFAKVAESNRYIRPNVDDSDVIDIKSGRHPVIEKQLPLGEAYIAN
DVYLDSEQQQIIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESARIGMVDKIFTRVG
ASDNISVGESTFMVEMNEASNILNNMSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEH
PDARAKTLFATHYHELNEMERSFKRIKNYNVSVKEVSNKVIFLRKLIPGGSEHSFGIHVA
KMAGMPKSIVKRSSEILKQLETDNRQESIDCKEKAKGKGKVKAKPVREIASAAEGYQLSF
FQLDDPVLSQVRDEIKNLDVNNLTPIEALNKLSEIRKIITGK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
gtggctaagatagttgaaaccccattgatgaagcagtatttcgatattaaggcgaaacat
ccggatgctgtccttttattccgtgtaggagacttttacgaaatgtatggcgaagatgcc
gtggtcggtgccgaaatactgggaatcgtacagactaaaaaagccaacggaccgggacaa
tttatcgaaatggcgggtttcccgcatcatgcgctcgatacctatctgccgaaactggtc
cgtgccggtaaacgtgttgcaatctgcgatcagctggaagacccgaagatgaccaagaaa
ctggtgaaacgaggggttacggagttggttacgccgggagtttctatcaatgacaatatt
ctgaaccataaggaaaacaacttccttgctgccgttcatttcgctaaagatgtttgcggc
gtcgcttttctggatatttcgaccggtgagttcctgacagccgagggaacgatcgattat
atcgacaaactgcttaataatttctctccgaaagaggtacttgtcgagcgtaacaaccgt
aagaaattcgaggaagtgttcggtccccgtttcttcactttcgagatggaggactgggta
ttttccgccgatgctgccaacgaccgcctgctgaaacatttcgagacgaagaacctgaaa
ggcttcggggtggaacatctgaaactgggcgttgtcgcttcgggagcgatcctctattat
ctggatcagacacaacatacgcatatttcgcatattacagcgctttcacgtatcgaggaa
gaccgttatgtgcgtctcgataaatttacggtacgcagcctggaactggtcggtacgatg
aatgatgagggaaccagcctgctggatgtgatagacaagacggtttccccgatgggatcg
cgtatgttgcgccgctgggtgctgttccccctgaaagatgtcaaaccgatccgggaccgt
cagaatgtggtggattatttcttccgtcatccggaggtaaaggatatactggatgaacag
atcgagcagatcggcgacctggaacgtattatttcgaaagtggctgtaggccgcgtttcc
cctcgtgaagtggtgcagctgaaagtcgctctccgggcgatcgaaccgatcaaagaggct
tgtatggcaagtgatgaaccgagcctttcccgtatcggcgaacagttgaatgcttgtacc
gagatacgcgaccggatagaaaaggagatcaataacgatccgccgtctttgctgaataaa
ggcggtgtcatagccaaaggggtcaatgcggagctggatgagttgcgtgccattgcttat
tccggcaaggattacctgattcaggtacaacagcgggaaagtgaaaagaccggcatcccg
agcctgaagattgcctttaacaacgtattcggttattatatcgaagtgcgtaatgcgcat
aaggacaaagtacctgccgaatggatacgcaagcagacattggtgaatgccgaacgttat
attacagaagaactgaaagagtacgaagaaaagatattgggcgctgaggaaaagatatta
tccctcgaaggccgcctgtttaccgagctggtgacttgtctggcggagtttataccccct
attcaggtggatgcgaatctgatcggtcgtctggattgcctgttgtcgtttgccaaggtg
gcggaaagtaatcggtatatccgtccgaacgtggatgattcagatgtgatcgatataaag
tcgggccgccatccggtgatcgagaaacagctgccgctcggcgaggcctatattgccaac
gatgtctatctggatagcgaacagcaacagatcatcattatcactggtccgaatatggcg
ggtaagtcggcgttgctgcgtcagacggcattgatcacgctgatggcacagatcggttgt
ttcgtccctgccgagtctgcccgtatcggtatggtagataagatatttacccgtgtgggg
gcttccgataatatctctgtcggtgagtctacctttatggtggagatgaacgaggcgtcg
aatatcctgaacaatatgtcttcacgcagcctcgttcttttcgatgagctgggacgggga
acaagtacctacgacggtatctcgattgcctgggcgatcgttgagtatatccatgagcat
ccggatgcccgtgccaagacgctttttgccactcattaccatgaactgaacgagatggaa
cgttctttcaaacggataaagaattataatgtctcggtgaaagaggtctccaataaggtg
atcttcctgcgtaagctgattcccggtggtagcgagcatagtttcggtatccatgtggcg
aagatggcgggtatgcctaaaagtatcgtgaaacgttccagtgaaatcctgaaacaactg
gaaacggataatcggcaggagagtatcgattgcaaagagaaagcaaaaggcaaaggtaag
gtaaaagcgaagccggtcagggaaattgcttctgctgccgaaggttatcaactcagtttc
ttccaactggacgatcctgttttaagccaggttcgcgatgagatcaagaatctcgatgtc
aacaaccttactccgatcgaagcccttaacaaattaagtgagatacggaagatcattaca
gggaaataa
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