Parabacteroides faecis: NXY11_23995
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Entry
NXY11_23995 CDS
T08643
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pfai
Parabacteroides faecis
Pathway
pfai00470
D-Amino acid metabolism
pfai00550
Peptidoglycan biosynthesis
pfai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfai00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NXY11_23995 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NXY11_23995 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfai01011
]
NXY11_23995 (murD)
Enzymes [BR:
pfai01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NXY11_23995 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfai01011
]
Precursor biosynthesis
Amino acid ligase
NXY11_23995 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
UVQ46174
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Position
6130885..6132219
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AA seq
444 aa
AA seq
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MKRIVVLGGGESGAGAAVLAKAKGFDVFVSDFSSIKPKYKDMLDAHGIRWEEGQHTEADI
LNADEIIKSPGIPDKAPMIQKLKAQGTHIISEIEFAGRYTDSKMICITGSNGKTTTTMLT
YHVLKEARVDVGLAGNVGNSLALQVAEDPHAVYVIELSSFQLDNMYDFKADIAILLNITP
DHLDRYNYEMQNYVNAKFRIIQNQTSEDAFIFWNDDPIIAREIAKRHPAATLYPFAETHE
DGVKGYTDNKQIVIETSNGTFTMDQDLLALTGTHNLYNSLASGIASKVVDIHDENIRASL
SDFTGVEHRLEKVARVRGVDYINDSKATNVNSCWYALQSMTTKLVLILGGTDKGNDYSEI
EELVKQKVRALIFLGVDNNKLHTFFDGKVAQIEDARSMEEAVNKAYKLAEKGDTVLLSPC
CASFDLFKSYEDRGDQFKACVRNL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggattgttgtattagggggaggagaaagcggtgcaggtgcagccgtgttggcg
aaggcaaaaggatttgacgtgttcgtttctgacttttcgtctatcaaacccaagtataag
gatatgctcgacgcccacgggattcgttgggaagaaggacagcataccgaagccgacatt
ctgaatgccgacgagatcatcaaaagccccggaatacctgacaaggctccgatgatccag
aaactgaaagcgcaggggacgcatatcatctccgaaatcgaatttgccgggcgatacacc
gattcgaagatgatctgtattaccggaagtaatggtaagacaacgactaccatgcttaca
taccacgtcctgaaagaagccagagtggatgtcggcctggccggaaacgtagggaacagc
ctggcattacaggttgccgaagacccgcacgcggtctacgtgatcgaactgagcagtttt
cagttggacaacatgtacgacttcaaagcggatatagctatcttgttgaatataacgccc
gatcatctggaccgttataactacgagatgcagaattatgtgaacgccaagttccgcata
atccagaaccaaacgtcggaagatgcgttcatcttctggaacgacgacccgatcatagcc
cgcgagatcgctaaacgccatcctgcggctactctttacccattcgccgaaacgcatgaa
gacggcgtgaagggatatacggataataagcaaatagtaattgaaacctcaaacggaaca
tttacaatggatcaggacttattggcattaacgggtacacataacctgtacaattcgctg
gcatcgggcatcgcatccaaagtggtcgatatccacgatgaaaatatacgggcttcactg
agtgactttaccggggtggaacaccgcctggagaaagtggcccgtgtacgcggagtagat
tatatcaacgactcgaaagcgacgaacgtgaactcttgctggtatgccttgcaaagtatg
acgaccaaactggtactgatactgggcggaacggacaagggtaacgactactccgagatt
gaagaacttgtaaaacaaaaagtacgtgccttgatcttcctgggtgtcgacaataacaaa
ctgcatactttcttcgacggaaaggtggcgcagattgaagatgcccgctcgatggaagaa
gcggtaaacaaagcttataaactggcagaaaagggagacaccgtgttgttatcgccttgc
tgcgccagcttcgacctcttcaagagttatgaagaccgcggtgatcagtttaaggcttgc
gtacgtaatttgtaa
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