Parabacteroides faecis: NXY11_24425
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Entry
NXY11_24425 CDS
T08643
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pfai
Parabacteroides faecis
Brite
KEGG Orthology (KO) [BR:
pfai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfai01011
]
NXY11_24425
Enzymes [BR:
pfai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NXY11_24425
Peptidoglycan biosynthesis and degradation proteins [BR:
pfai01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NXY11_24425
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
UVQ46254
LinkDB
All DBs
Position
6230363..6231889
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AA seq
508 aa
AA seq
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MKYLLSLLCFCCFVTVAHAQETITENEEPQYSNLSADSLSVDVGLIPESLDADVDSLLRS
WHVQYFSKRDEYCHDDEANVWFPDSVYRERLESLPRVISLPYNKVVRDCIDLYADRRRNL
VRYMLGMADFYFPIIEQVLDEHGLPIELKYLAVVESALNPVALSRVGACGLWQFMLPTGK
IYGLEINSLVDDRRDPVKATHAACRYFKDMYAIYGDWNLVLASYNCGPGNVNKAIRRSGG
KTDFWEIFPYLPKETRSYVPLFIAANYIMNYYCDHNICPMQTSMPLATDTVVVTKALHLE
QVAEVLQMDIEQVRALNPQYKRDIIPGNTEPSVLKLPVNQTYAFIDKEDTIYTHRAEDLL
ENCLAYNPNGTESGKSSNREKITHRVASGENIYTISDRYGVTPKEVRQWNGLKSNRLASG
RRLTLYVDNGGVAFASATKSKTTQKTTSSSEIVEKQSNGFISYKVKSGDSLYTISKKYPG
VSAALIQKANGLSNANIRPGQVLKIPVG
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacttattatcattactctgtttctgctgtttcgttactgttgcccatgcacag
gaaacaataactgaaaatgaagaacctcagtattcgaacctctctgccgattctctgtcg
gtcgatgtgggcttgatacccgaaagtctggatgcagatgtcgacagtctgcttcgttcc
tggcatgtgcaatatttctccaaacgggatgaatactgccatgacgatgaagcaaatgtg
tggttccctgactctgtttaccgggaacgtctggaaagtttgccgcgtgttatttcttta
ccttataataaggtagtacgcgattgtatcgatttatatgccgaccgccgccgtaacctc
gtacgctatatgctgggtatggcggatttttattttcctattatcgagcaggtgctggat
gaacatggtttacctattgaactgaaatatctggctgtagtggaaagtgccttgaatccg
gtcgctttatcccgtgtcggtgcctgcggcttatggcagttcatgcttccgacaggtaag
atttacggtttggagatcaacagccttgtcgacgatcgccgcgatccggtaaaagccact
catgctgcctgccgttattttaaagatatgtatgccatctacggtgactggaatctcgtg
ctggcttcttataactgtggcccaggtaatgtgaataaagcgatacgccgttcgggaggt
aagactgatttctgggagatattcccttatctgcccaaagaaacccggtcgtatgttccc
ctgttcattgcagccaattatattatgaactactattgcgatcataatatttgcccgatg
caaacaagtatgccattggctaccgatacggttgtggttacaaaagcattgcatctggag
caggtggcggaagtgttgcaaatggatatagagcaggtccgtgccttgaatccgcaatat
aagcgcgatatcattcccggaaacacagaaccatccgtactgaagttgccggtaaaccag
acatatgcttttattgataaagaagatacgatttacactcaccgtgcggaagatttgctg
gagaattgcctggcctataatccgaatggaaccgagagcggaaaatcgtccaatcgtgaa
aagataacccatcgtgtagcttccggtgaaaatatttatacaatatccgatcgctatggc
gtgacaccgaaagaagtgcgccagtggaacggattgaagtcaaatcgtttggctagtggt
cgccgcctgactttgtatgttgataacggaggtgtggcttttgcttccgcaacgaagtct
aaaacgacacagaagacgacttcttcatccgaaattgttgaaaaacagagtaatggcttt
atctcttataaggttaaatcgggagattcactgtatacgatctctaaaaagtatccaggt
gtatccgctgctttgatacaaaaggcgaacggattatcgaatgcaaatattcgtcccggt
caggttctgaaaattcctgtgggataa
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