Parabacteroides faecis: NXY11_25915
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Entry
NXY11_25915 CDS
T08643
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pfai
Parabacteroides faecis
Pathway
pfai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NXY11_25915 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfai03019
]
NXY11_25915 (recQ)
03400 DNA repair and recombination proteins [BR:
pfai03400
]
NXY11_25915 (recQ)
Enzymes [BR:
pfai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NXY11_25915 (recQ)
Messenger RNA biogenesis [BR:
pfai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NXY11_25915 (recQ)
DNA repair and recombination proteins [BR:
pfai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NXY11_25915 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ-1-like_HTH
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
HTH_40
HHH
zf-CXXC
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
UVQ46521
LinkDB
All DBs
Position
6610029..6612212
Genome browser
AA seq
727 aa
AA seq
DB search
MAKKDSITEHLKTHFGFDTFKGNQKAIIENVLAGNDTFVLMPTGGGKSLCYQLPSIMMEG
TAIVISPLIALMKNQVDAMRNFSEEDGVAHFINSSLNKSAIDQVKEDIMAGRTKLLYVAP
ESLTKEENVEFLRNVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKRPLIALTAT
ATPKVQHDIQKNLGMIDASVFKSSFNRSNLYYEVRPKDENIDREIIKYIKANEGKSGIVY
CLSRKKVEEFADILKANGIKALAYHAGMDSQQRSANQDAFLLEKADVIVATIAFGMGIDK
PDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCIAFYAYKDLQKLEKFMQGKPVAEQEI
GKQLLLETAAYAETSVCRRKVLLHYFGEEYLEDNCGNCDNCLNPKKQVEAKELLSAVLEV
ISTLKEKFKADYIVSMLVGNETSEIQSYKHNEMEIFGSGTDEDDKTWNAVIRQALIAGYL
TKDIENYGLLKISPKGKDFMKKPVSFKITKDNEFEEEEESEVPVRGGATCAVDPILYSMM
KDLRKKLSKRLEVPPFVIFQDPSLEAMATTYPVTLDELQNIPGVGAGKAKRYGQEFITLI
KKHVEENEIERPEDLRVRTVANKSKLKVSIIQRIDRKVALDEIALTNGLEFNELLDEIEA
IVYSGTRINIDYFVNDVMDEDHIEDIYEYFKDSETDDLEDAIEELGGDYTEEEIRLVRIK
FLSEMAN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaggatagtataactgagcatttaaagactcattttggttttgataccttt
aaagggaatcagaaagcaatcattgaaaatgtgctggccgggaatgatacctttgtgttg
atgcccaccggtggaggtaagtctctctgttaccagttgccttctattatgatggaaggt
acggcgatcgtaatttcccccctgatcgctctgatgaagaatcaggtggatgccatgcgt
aatttcagcgaagaagacggagtggcccattttattaattcatcactgaataagtcggcg
atcgaccaggtgaaggaagatattatggctggccgaacgaagctgctttatgttgctccc
gaatcactgacaaaggaagaaaatgtcgaattcctgcgcaatgtgaaaatctcattttac
gcagtggatgaggcccattgtatctctgaatgggggcatgatttccgcccggaataccgg
cggatacgtccgatcatcaatgagataggaaaacgtccgttgattgcgctgactgctacc
gcgactccgaaggtacaacatgatatccagaaaaacctgggtatgatagatgcttcagtt
ttcaaatcctcctttaaccgttctaatttatattacgaagttcgtccgaaggatgaaaat
atagaccgcgagatcattaaatatattaaagccaacgaaggtaaatcgggtattgtttat
tgtctgagccgcaagaaggtagaggagtttgccgatattctgaaggcaaacgggatcaaa
gcgcttgcttatcatgccggaatggattcgcaacaacggtcggccaatcaggatgcgttc
ctgttggaaaaagcagacgttattgtggctactatcgcattcggtatggggatcgataag
ccggacgtgcgttatgtcattcattacgatataccgaagagtctcgaaggttattaccag
gaaacaggccgtgccggccgtgatggcggtgaagggcagtgtatcgccttttatgcttat
aaggatttacagaagctggagaagtttatgcagggtaaacctgtagcggaacaggagatc
ggcaagcaactgttgcttgaaacagccgcctatgctgaaacatccgtatgccgtcgtaaa
gtcctgttgcattattttggtgaagaatacctggaagataattgtggaaattgtgataat
tgtttgaaccccaaaaagcaagtggaagcgaaagagttattgagtgcggtacttgaagtg
ataagtactttaaaagaaaaatttaaggcagactatattgtcagtatgttggtcgggaat
gagacctccgaaattcaatcttacaaacacaatgaaatggaaatcttcggttccggaacg
gacgaagacgacaagacctggaatgcggtgatccgtcaggcactgatcgctggttatctg
acaaaagatatcgagaattatggtttgctgaagatatcgccgaagggaaaagacttcatg
aagaaaccggtatctttcaaaataacgaaggataacgagtttgaagaggaagaagaatca
gaagttcctgtacgtgggggggctacctgtgccgtggacccgatcctttattctatgatg
aaggatttgcgtaagaaattatccaaacggttggaagttcctccttttgtgattttccag
gatccgtcattggaagcgatggctacgacttatccggtcactttggatgagttgcagaat
atccccggtgttggtgccggtaaggcaaaacgctacggacaggaattcataacactgatc
aagaagcatgtcgaagaaaatgagatcgaacgtccggaagatttgcgtgtccgtactgta
gccaataagtcgaagctgaaagtttccattatccaacggatcgaccggaaggttgccctg
gatgaaatcgcattgacgaatggccttgaatttaacgaattgctggatgagatcgaagcg
attgtttattcgggaacacgtatcaatattgattactttgtaaatgatgtgatggatgaa
gatcacatagaagatatctatgaatatttcaaggattccgaaacggatgacctggaagat
gcgatcgaagaattaggcggcgattatacggaagaagaaattcgtctggtacgcattaag
ttcctttcagagatggccaattaa
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integrated database retrieval system
