Parabacteroides faecis: NXY11_26135
Help
Entry
NXY11_26135 CDS
T08643
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pfai
Parabacteroides faecis
Pathway
pfai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NXY11_26135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfai03021
]
NXY11_26135
03400 DNA repair and recombination proteins [BR:
pfai03400
]
NXY11_26135
Enzymes [BR:
pfai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NXY11_26135
Transcription machinery [BR:
pfai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NXY11_26135
DNA repair and recombination proteins [BR:
pfai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NXY11_26135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
CRM1_C
Motif
Other DBs
NCBI-ProteinID:
UVQ46563
LinkDB
All DBs
Position
6650375..6651367
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQKPDKVLMLEADNFFGKFEFRPLEPGYGITIGNALRRILLSSLEGFAITSIKIE
GVDHEFGTIPGVIEDVTNIILNLKQVRFKHIVDDIENEKVSITVSGSEVFKAGDIGKQLT
GFEVLNPDLVICRLDPNASFQIELTINKGRGYVPADENRDPNADVHVIAIDSIYTPIRNV
KYSIENFRVEQKTDYEKLVLEIATDGSIHPKEALKEAAKILIHHFMLFSDEKIAIETVDT
DGNEEFDEEVLHMRQLLKSKLADMDLSVRALNCLKAADVETLGELVKFNKNDLLKFRNFG
KKSLTELDELLESLNLSFGMDITKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgatattagcatttcaaaaacccgataaagtattaatgttggaagcggacaatttc
ttcggaaagtttgaatttcgtccgttggaacccggctatggtattactataggtaatgct
ctgcgccgtattctcctgtcgtcgcttgaaggttttgctattacatccattaagatcgaa
ggggttgaccatgaatttggtacaatccccggtgttattgaagatgtaacgaacattatc
ttgaacttgaaacaggtacggttcaagcatattgtagacgacatagagaatgagaaagta
agtattactgtttcgggttccgaagtgttcaaagccggtgatataggtaaacaactgacc
ggattcgaagtattgaatcctgatctggttatttgccgtttggatccgaacgctagtttc
cagattgaattaacaataaataaaggacgcggatacgttcccgctgatgaaaacagagat
ccgaatgcagacgttcacgttatcgcaatcgactctatttatactcctatacgtaatgtt
aagtattcaatcgaaaacttccgtgttgagcaaaagacggactacgaaaagttggttctt
gaaatagccacagatggttctattcatccgaaggaagcgttgaaagaagctgctaagatt
ctgattcatcattttatgttgttctcagatgaaaagattgcgatcgagacagtggatact
gacggcaatgaagaattcgatgaagaagttcttcacatgcgccagttgcttaagagcaag
ctagcagatatggacctttccgttcgtgctttgaattgcttgaaagctgcagatgttgaa
acattgggtgaactggttaaatttaacaagaatgacttgttgaaattccgtaacttcggt
aagaagtcgctcactgaacttgatgaactgcttgaaagcctgaacctttcattcggtatg
gatatcacgaaatataaattagataaagagtaa
DBGET
integrated database retrieval system
