Pseudomonas fakonensis: KSS94_00375
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Entry
KSS94_00375 CDS
T07698
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak03030
DNA replication
pfak03410
Base excision repair
pfak03420
Nucleotide excision repair
pfak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KSS94_00375 (polA)
03410 Base excision repair
KSS94_00375 (polA)
03420 Nucleotide excision repair
KSS94_00375 (polA)
03440 Homologous recombination
KSS94_00375 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfak03032
]
KSS94_00375 (polA)
03400 DNA repair and recombination proteins [BR:
pfak03400
]
KSS94_00375 (polA)
Enzymes [BR:
pfak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KSS94_00375 (polA)
DNA replication proteins [BR:
pfak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KSS94_00375 (polA)
DNA repair and recombination proteins [BR:
pfak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KSS94_00375 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KSS94_00375 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
QXH51643
LinkDB
All DBs
Position
73805..76555
Genome browser
AA seq
916 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRRQYPDSLFAVVFD
AKGGTFRDAMFAEYKANRPSMPDDLRVQVEPLHASVRALGYPLLCVEGVEADDVIGTLAR
SSATAGRPVIISTGDKDMAQLVDGHVTLVNTMTGSVMDVAGVHEKFGVGPEHIIDFLALM
GDKVDNIPGVPGVGEKTAVGLLTGIGGGLRDLYENLDKVPGLAIRGAKTLPAKLEEHRDS
AFLSYELATIKCDVPLDVEVDALVCGEPDREALLALYTEMEFKSWVAEVQRDAAQAGDSP
AAVAQAPAEKVEPKYETILDQARFDAWLEKLRSAELFAFDTETTGLDAQKAQLVGLSFAV
TPYEAAYVPLAHDYEGAPAQLDREAVLLALKPLLEDPAKGKVGQNAKYDINILANASPAI
DMRGVRYDTMLESYVFNSTATRHDMDSLAQRYLDHTTIAFEDIAGKGAKQLTFNQIALDK
AGPYAAEDADITLRLHRALQARLAETPSVQPVLMDIEMPLVPVLARIERQGALVDDVLLG
VQSGELGAKMAELEREAIELAGEPFNLGSPKQLGVILYDKLGMPVLSKTAKGQPSTAEAV
LDELAEQGYPLPKVLMQYRTLSKLKSTYTDKLPGQINPRTGRVHTSYQQAVAATGRLSSS
DPNLQNIPIRTAEGRRIRQAFIASPGYKLLAADYSQIELRIMAHLAKDEGLLHAFRNDLD
VHRATAAEVFGVDLEAVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQDYIDRYF
ARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERTAINAPMQGTA
ADIIKRAMVAVDNWLSDSGLDARVILQVHDELVLEVREDLVQQVKDEIRGHMSGAAQLDV
PLLVEVGIGSNWDEAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcgcccctcgtcctggtggacggttcgtcctacctctaccgcgccttccac
gcgctgccgccgctgaccacctccaagggcatgcccaccggtgcggtcaagggcgtgctg
aacatgctcaagagcctgcgccggcagtacccggacagcctgttcgcggtggtcttcgac
gccaagggcgggaccttccgcgatgccatgttcgccgaatacaaggccaaccgcccgagc
atgcccgacgatttgagggtgcaggtcgagccgctgcacgccagcgtgcgcgcgctgggc
tacccgcttttgtgtgttgaaggggtcgaggcggatgacgtgatcggcaccctggcgcgc
agcagcgccaccgctggccgcccggtgatcatttcgactggcgacaaagacatggcccag
ttggtggacggccacgttaccctggtcaacaccatgaccggcagcgtgatggacgttgcc
ggcgtgcacgaaaagttcggcgtgggccccgagcacatcatcgacttcctggcgctgatg
ggcgacaaggtcgacaacattcccggtgtgccgggtgtgggcgaaaaaaccgccgtgggc
ctgctgaccggcatcggtggcggcctgcgcgatctgtacgaaaacctcgacaaggtgccg
ggcctggccattcgaggggccaagaccctgccggccaagctcgaagagcaccgtgactcg
gcgtttttgtcgtacgagctggcgaccataaagtgcgatgtgccgctggacgtcgaggtc
gatgccctggtgtgcggcgagccggaccgtgaagcgctgctggcgctgtacaccgagatg
gagttcaagagctgggtcgccgaggtgcagcgtgacgccgcccaggccggtgactcgcct
gctgcggttgcccaggcaccggccgaaaaggtcgaacccaagtacgaaaccattctcgat
caggcacgtttcgacgcctggttggagaaactgcgcagcgcagagctgttcgctttcgat
accgaaaccactggcctggatgcgcagaaggcgcagttggtgggcttgtcgttcgccgtc
accccgtacgaggccgcctacgtgccgctggcccatgactacgaaggcgccccggcccag
ttggaccgcgaggctgtgctgctggcgctcaagccgctgctggaagacccggccaagggc
aaggtcgggcagaacgccaagtacgacatcaacatcctggccaacgccagcccggccatc
gacatgcgcggcgtgcgctacgacaccatgctcgagtcgtacgtgttcaactccaccgcc
acccgccacgatatggacagcctggcgcaacgctacctggaccacaccaccattgccttc
gaagacatagccggcaagggcgccaagcagctgaccttcaaccagatcgccctggacaag
gccggcccgtatgccgccgaagacgccgacatcaccctgcgcctgcaccgcgcgctgcag
gcgcgcctggccgagacgccaagcgtgcagccggtgctgatggacatcgagatgccgctg
gtgcctgtgctggcgcgcatcgagcgccagggcgcgctggtcgatgacgtgctgctgggc
gtgcagagcggtgaactgggggcgaaaatggccgagcttgagcgcgaggcgatcgagctg
gccggcgagccgttcaacctcggttcgcccaagcagctgggggtgatcctgtacgacaag
ctgggcatgccggtgctgagcaagaccgccaagggccagccgtccaccgccgaagccgtg
ctcgacgagctggccgagcagggctacccgctaccgaaggtgctgatgcagtaccgcacc
ttgagcaagctcaagagcacctacaccgacaagctgccggggcagatcaacccgcgcacc
gggcgtgtgcacacctcttaccagcaggccgtggctgccaccgggcgcctgtcgtccagc
gacccgaacctgcagaacatcccgatccgcaccgctgaaggccgacgcattcgccaggct
ttcatcgccagccccggctacaagctactggcggcggactactcgcagatcgagctgcgc
atcatggcccacctggccaaggacgaaggcctgttgcatgccttccgtaacgacctggac
gtgcaccgcgccactgctgccgaggtgttcggtgtggacctggaggcggtcaccaccgac
cagcgccgcagcgccaaggcgatcaacttcggtttgatctacggcatgagcgcattcggc
ctggccaagcagatcggcgtcgaccgcaagcagtcccaggactacatcgaccgctacttc
gcccgatacccgggcgtgctggcctatatggagcgcacccgcgcccaggctgccgagcag
ggcttcgtcgaaaccttgttcggccggcgtctgtacctgcccgacatcaacgccaagaac
cccgcgctgcgcaagggcgccgaacgcacggcgatcaacgcaccgatgcagggcacagcg
gcagacatcatcaagcgcgccatggtggccgtggacaactggctgagcgacagcgggctg
gatgcgcgggtgatcctgcaggtgcacgacgaactggtgctggaggtacgcgaggacctg
gttcaacaggtcaaagatgaaattcgcggccacatgagcggcgcggcgcagctggatgta
ccgctgcttgtggaggtgggaatcggctcgaattgggacgaagctcactga
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