Pseudomonas fakonensis: KSS94_01390
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Entry
KSS94_01390 CDS
T07698
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KSS94_01390 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfak02044
]
KSS94_01390 (tssB)
Secretion system [BR:
pfak02044
]
Type VI secretion system
Imp/Vas secretion system core components
KSS94_01390 (tssB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
HTH_NPRL3
Motif
Other DBs
NCBI-ProteinID:
QXH51831
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All DBs
Position
complement(327334..327849)
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AA seq
171 aa
AA seq
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MAKDSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVLSDLAGKPAEPLPAVADRK
FLEIDVDNFDSRLKAMKPRVAFNVPNELTGEGNLSLDITFESMDDFSPAAVARKVDALNQ
LLEARTQLANLLTYMDGKTGAEDIILKAIKDPALLQALASAPKPADSEPSA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaagacagctcccagaaattcatcgcgcgcaaccgcgcgccgcgcgtgcagatc
gagtacgacgtcgaactgtacggcgccgagaagaaggtccagttgccgttcgtcatgggc
gtgctgtcggacctcgccggcaagccggccgagccgctgccggcggtggccgaccgcaag
ttcctggaaatcgacgtcgacaacttcgactcgcgcctgaaagccatgaagccgcgggtg
gcgttcaacgtgcccaacgagctgaccggtgaaggcaacctgagcctggacatcaccttc
gagagcatggacgacttcagcccggccgccgtagcgcgcaaggtcgatgccctgaaccag
ctgctcgaggcccgcacccagctggccaacctgctgacctacatggacggcaagaccggc
gccgaggacatcatcctcaaggccatcaaggacccggccctgctgcaggccctggccagc
gccccgaaacccgccgattccgagccgagcgcctga
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