Pseudomonas fakonensis: KSS94_01420
Help
Entry
KSS94_01420 CDS
T07698
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak02025
Biofilm formation - Pseudomonas aeruginosa
pfak03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KSS94_01420 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KSS94_01420 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfak02044
]
KSS94_01420 (tssM)
Secretion system [BR:
pfak02044
]
Type VI secretion system
Imp/Vas secretion system core components
KSS94_01420 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
Motif
Other DBs
NCBI-ProteinID:
QXH51836
LinkDB
All DBs
Position
334110..337616
Genome browser
AA seq
1168 aa
AA seq
DB search
MKAFFSFVIRWVIPVLGLLALSLIIWFVGPLLDALVPATPRVVLIVLLFAVWVSYRVWRV
IQARRQAAKVMESLAAETAPDPASVATAEELATLRQRMDEALVLLKKARLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGEGAIRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSHAQVDKAAWLGFLDLLKSQRSRRPIDGAFIAISLSDLLLGSDAERAAHAAAIR
TRIQELYSQLGVRFPIYLMLTKLDLVPGFMEFFDNLGKEERAQVWGMTFALDDGQQGDGP
LAQFSNEFGLLEQRLNQRLVERLQQERDPARRDLVYGFVQQFAALRGNLKSFLDGVFKPN
AFEERALLRGVYLTSGTQEGSPIDRLIGSMAQSMGLDRAHLARQNGTGRSYFIEKLFSAV
AFAERGLVGSNPKVEQRRKWLARGALALSVALVLVVGSLWAVSYRANQQYIAEVDSRLKP
VGKSVQELSPAQRNVLEVLPLLNAVRRLADDPPGWAEGLGLYQGDMLEGESQSVYRKLLI
AIFAPRLVTRIEEQLYAGGPSDYLYEGLKAYLMLADGEHYDPEFIKAWVTLDWERSLPRD
LAPDMRQALEQHLAALFDKRPPNARLDQRLIDDTRRQLQQLPVAQRVYDRVKRQKLPAGV
SDFRVSDAAGRDAALVFRFKSGKPLSEPLPGIFSVEGYRKAFLAASLAQATTLAEERWVL
GREPGEAGDAKRLADDVLQLYYQDYIRHWDALLADLDFVPITSVGQAADVLRVLSGPTSP
MKKLLQAVAHETDLSQPTTLDKVKDKAEQAGVDQLRQRLGGLLGDTPLASDNPAVRQLDP
VTEHFAEVAALVATGEGQPAAIDGLLTDLNALYVQVSAMVGASGDALLGEAKNQAQAAAQ
RVALGAARQPKVVQNLVSSVLGSTHNIVMGGVRSQLNAAWTSEVVNVYRQSLSGRYPLVA
GSSRDATLEDFGQFFGVGGVMDNYFRKYLQPYVNTSSSPWSWQPGAAQKLGINSNVLATF
QRAASIRDAFFRNTSGLQPGVRFELKPVAMDASITQFLLDLDGQQVSYDHGPSRPVALQW
PNPNSIGVVRLSVTPPLASGRSGLTVEGPWAWFRLLDQSDLVAGNSPERFNLRLRVDGAS
VSYELRASSAFNPFRSRVVSGFSLPERL
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagttttgtcattcgctgggttatcccggtactcggcctgctggcc
ctgagcctgatcatctggttcgtcggcccgctgctggacgcgctggtgccggccacccca
cgggtggtgctgatcgtgctgctgttcgcggtgtgggtcagctatcgcgtgtggcgggtg
atccaggcccgccgccaggccgcaaaagtgatggagagcctggctgccgaaaccgcgccg
gaccctgccagcgtggccaccgccgaagagctggccaccctgcgccagcgcatggacgaa
gccctggtgttgctgaaaaaagcgcgcctgggtggtgacgagcggcgcaacctttacgag
ctgccgtggtacgtgatcatcggcccgcccggttcgggcaagaccaccgcgctggtgaac
tccggcctgcacttcccgctggccgcgcaactgggcgagggcgccatccgtggcgtgggc
ggcacgcgcaattgcgactggtggttcaccgaccaggccgtgctgctggacaccgctggc
cgctacaccacccaggacagccatgcgcaagtggacaaagccgcctggttgggctttctc
gacctgctcaagagccagcgttcgcgccggcccatcgacggtgcgttcatcgccatcagc
ctgtccgacctgctgctgggcagcgacgccgagcgcgccgcccatgccgcagccattcgc
acccgtatccaggagctgtacagccagctgggggtgcgcttcccgatctacctgatgctg
accaagctcgacctggtgccgggcttcatggagttcttcgacaacctcggcaaggaagag
cgcgcccaggtgtggggcatgaccttcgccctggacgacggccagcaaggcgacggcccg
ctggcgcagttcagcaatgaattcggcttgctcgaacagcgcctgaaccagcgcttggtc
gagcgcctgcaacaggagcgcgacccggcgcggcgcgacctggtgtacggcttcgtgcag
cagttcgcggccctgcgcggcaacctgaaaagcttcctcgacggcgtgttcaagcccaac
gccttcgaagagcgcgccctgctgcgcggggtgtacctgaccagcggcacccaggaaggc
agccccatcgaccgcctgatcggcagcatggcccagagcatgggcctggaccgcgcgcac
ctggcgcggcagaacggcaccgggcgcagctacttcatcgagaagctgttcagcgccgtg
gccttcgccgagcggggcctggtgggcagcaacccgaaagtcgagcagcggcgcaaatgg
ctggcccgcggcgccctggccctgagcgtggccctggtgctggtggtcggcagcctgtgg
gcggtgagctaccgcgccaaccagcagtacatcgccgaggtggacagccgcctcaagccg
gtgggcaagagcgtgcaggagctgagcccggcgcagcgcaacgtgctcgaggtgctgccg
ctgctcaacgccgtgcgccgcctggccgacgacccgcccgggtgggccgagggcctgggc
ctgtaccagggcgacatgctcgaaggcgaatcgcaaagcgtctaccgcaagttgctgatt
gccatcttcgccccgcgcctggtcacccgcatcgaggagcagctgtacgccggcggccct
tccgactacctgtacgaaggcctcaaggcctacctgatgctggccgacggcgagcactac
gaccccgagttcatcaaggcctgggtcaccctggactgggaacgcagcctgccccgcgac
ctggccccggacatgcgccaggccctggagcagcacctggcggcgctgttcgacaagcgc
ccgcccaacgcccgcctggaccagcgcctgatcgacgacacccgtcgccagttgcagcaa
ctgccggtggcccagcgcgtgtacgaccgggtcaaacgccagaagctgcccgccggcgtg
agcgattttcgcgtcagcgacgccgccgggcgcgatgctgcgctggtgttccgtttcaag
agcggcaagccgctgagcgagccgctgccgggcatcttcagcgtcgagggctaccgcaag
gcgttcctggccgccagccttgcgcaggccaccaccctggccgaagagcgctgggtgctg
ggccgcgagccgggcgaggcgggtgatgccaagcgcctggccgacgacgtgctgcagctg
tattaccaggactacatccgccactgggatgccctgctggctgacctggactttgtgccc
atcaccagcgtcggccaggccgccgacgtgctgcgggtgctgtccgggccgacttcgccg
atgaaaaaactgctgcaggcggtggcccatgaaaccgacctgtcccagcccaccaccctc
gacaaggtcaaggacaaggccgagcaggccggggtcgaccagttgcgccagcgcttgggt
ggcctgctgggcgacacgccactggccagcgacaaccccgccgtgcgccagctggacccg
gtaaccgagcacttcgccgaagtggctgcgctggttgcaactggcgaaggccaacccgcg
gccatcgacggcttgctcaccgacctgaacgcgctgtacgtgcaggtgagcgccatggtc
ggggccagtggcgatgcgctgctgggcgaggccaagaaccaggcccaggccgccgcgcag
cgggtggccctgggtgcggcgcgccagcccaaggtggtgcagaacctggtcagctcggtg
ctgggctcgacccacaacatcgtcatgggcggggtgcgcagccagctcaacgccgcctgg
accagcgaggtggtcaacgtctaccgccagtccctgagcggccgctacccgctggtggcc
ggcagctcgcgggacgccaccctggaagacttcggccagttcttcggcgttggcggggtg
atggacaactacttccgcaagtacctgcaaccttacgtcaacacctccagcagcccctgg
agctggcagccgggtgcggcgcaaaagctcggcatcaacagcaacgtgctggccaccttc
cagcgtgcggcgagcatccgcgatgcgttcttccgcaataccagcggcctgcaaccgggg
gtgcgcttcgagctcaagccggtggcgatggacgccagcatcacccagttcctgctcgac
ctcgacggccaacaggtcagctacgaccacggcccaagccgcccggtggcgctgcagtgg
cccaaccccaacagcattggtgtggtgcgcctgtcggtaaccccgccactggccagcggc
cgctcggggctgaccgtggaagggccgtgggcctggttccgcctgctcgaccagtcggac
ctggtggccggcaactcccccgagcgcttcaacctgcgcctgcgggtcgatggcgccagt
gtgtcctacgagctgcgtgccagcagcgccttcaacccgttccgcagccgagtggtcagc
ggtttcagcctgccggagcgcctgtga
DBGET
integrated database retrieval system
