Pseudomonas fakonensis: KSS94_02040
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Entry
KSS94_02040 CDS
T07698
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak03030
DNA replication
pfak03430
Mismatch repair
pfak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KSS94_02040
03430 Mismatch repair
KSS94_02040
03440 Homologous recombination
KSS94_02040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfak03032
]
KSS94_02040
03400 DNA repair and recombination proteins [BR:
pfak03400
]
KSS94_02040
Enzymes [BR:
pfak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KSS94_02040
DNA replication proteins [BR:
pfak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KSS94_02040
DNA repair and recombination proteins [BR:
pfak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KSS94_02040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QXH51951
UniProt:
A0ABX8N6F3
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All DBs
Position
complement(478446..479156)
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AA seq
236 aa
AA seq
DB search
MNLLAWLRPPAPELPDSLRQRIKALPAPAPLAVCSLREQRWVVLDLETSGLNLNRDQVLS
IGAVAIEDGAIDLGHPFERTLHRPEQKTNASVLIHGLGPSALAAGADPAEALLELMAFIG
DSPVLAFHAPFDQRMLARALKDSLGLRLQHPFFDVAELAPLLNPDTVLREAGLDDWIARF
GLEVAARHHASADAQATAELALILFSQARRQQLDSPLQLEQRLKQWRRRKAQGHGL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgctcgcctggctgcgcccgcccgcccctgaactgcccgacagcctgcgccag
cgcatcaaggccctgcccgccccggcgccactggcggtgtgctcgctgcgcgaacagcgc
tgggtggtgctggatctggaaaccagcggcctgaacctgaaccgcgaccaggtgctatcg
atcggcgcggtggccatcgaggacggtgccatcgacctcggccacccgttcgagcgcacc
ctgcatcgccccgaacagaaaaccaatgccagcgtactgatccacggcctgggccccagc
gccctggccgcaggtgcagaccccgccgaggcgctgctggagctgatggcgttcatcggc
gacagcccggtgctggccttccacgccccattcgaccagcgcatgctggcccgcgcgttg
aaggacagcctgggcctgcgcttgcagcacccgttcttcgacgtggccgaactggccccg
ctgctcaaccccgacaccgtactgcgcgaagccggcctggacgactggatcgcccgtttc
ggcctggaagtcgcagcccgccaccacgccagtgccgacgcccaggcgaccgcagagctg
gccctgatcctgttcagccaggcccgtcgccagcagctcgacagcccgctgcaactggag
cagcgcctcaagcaatggcgccggcgcaaggcccagggccacgggctctag
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