Pseudomonas fakonensis: KSS94_03105
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Entry
KSS94_03105 CDS
T07698
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pfak
Pseudomonas fakonensis
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfak03000
]
KSS94_03105
Transcription factors [BR:
pfak03000
]
Prokaryotic type
Helix-turn-helix
Other families
KSS94_03105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_5
PAS_9
PAS_4
HTH_23
HTH_AraC
HTH_17
HTH_7
AAA_2
HTH_22
HTH_32
HTH_IclR
HTH_20
PAS_8
RWP-RK
HTH_10
HTH_30
HTH_50
MCM
AAA
HTH_Tnp_1_2
TrmB
ANT
HTH_28
HTH_26
NACHT
HVO_A0261_N
DUF7317
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
QXH52141
UniProt:
A0ABX8N6Z9
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All DBs
Position
691356..693335
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AA seq
659 aa
AA seq
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MQSNPFSRHAQQVLTVAHGQASGPGSDPSIARSWLRCLEDYHLDPARAQAPVVLEHGRLL
ESRESLRQVLQIADHEMNSLHQQLSGAGHAVLLTDARGVILNCVTASSERRIFERAGLWL
GADWSEAREGTNGIGTCLVERQALTIHQDEHFRGRHTGLTCSASPVFDPHGELLAVLDVS
SARPDVSRQSQFHTMALVNLSAKMIESCYFLRHFEQQWLLRFHLQAESVGLFSEGLLAFD
GDGRICAANQGALNLLGTIRGGVLGKPVEMFFACKHDELFSRATPQGSAAWPLHTRDGRQ
VFASLRGRAHTPVWSVALAQPQREVELGICLLDPALQQEFRRAVRVFERDVPLLLRGETG
CGKEAFAQAVHQASARRHKPFVAINCASIPESLIESELFGYRGGSFTGARKEGMRGKLVQ
ADGGTLLLDEIGDMPLALQTRLLRVLEERQVVPIGGEPQAVDVRIVSATHRDLLERVAQG
SFREDLYYRLNGLEVALPAVRERSDKGPLLDFLLRQEAQGQPVALDPSARQALLDFAWPG
NVRQMRNVLRTLVALCDEGQIGFEELPAVIRSAPIPVGAALCRERGAQRPQDHDDTAEIA
GAAAQPFRDTRPLLHAERDVLLAVLEAKRWHLTQVAEHLGISRNTLYRKLRKHGIARAG
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcaacccgttcagccgccatgcccagcaagtgctgaccgttgcccacggccag
gccagcgggccgggcagcgacccatcgattgcccggtcctggctgcgctgcctggaggac
taccacctcgacccggcccgcgcccaggccccggttgtgctggagcacggtcgcctgctg
gagagccgcgaaagcctgcgccaggtgctgcaaattgccgaccacgagatgaacagcctg
caccagcagttgtccggtgccgggcatgcggtgctgctcaccgatgcccgcggggtgatc
ctcaactgcgtcaccgcctccagcgagcggcgcatcttcgagcgcgccggcctgtggctg
ggcgccgactggagcgaagcccgcgagggtaccaacggcatcggcacctgcctggtggag
cgccaggccctgaccattcaccaggacgagcactttcgcgggcgccacaccggcctgacc
tgctcggccagcccggtgttcgacccgcatggcgagctgctggcggtgctcgacgtgtcg
tcggcgcgcccggacgtgtcgcgccagagccagttccacaccatggcgctggtcaatctg
tcggcgaaaatgatcgaaagctgctacttcctgcgccacttcgagcagcagtggctgctg
cgttttcacctgcaggccgagtcggtcgggctgttcagcgaggggttgctggccttcgat
ggcgacgggcgcatctgcgccgccaaccagggcgcgctgaacctgctggggaccatccgc
ggcggggtgttgggcaagccggtggagatgttcttcgcctgtaagcatgacgaattgttc
agccgcgccacgccacaaggcagcgcggcctggccgctgcatacccgcgatgggcgccaa
gtgttcgccagcctgcgcggccgggcgcacacgccggtatggtcggtggccctggcgcaa
ccacagcgcgaggtcgagctcggcatctgcctgctcgacccggccttgcagcaggaattt
cgccgcgcggtacgggtgttcgagcgtgatgtgccgttgctgctgcgcggcgagaccggt
tgcggcaaggaggcctttgcccaggccgtgcaccaggccagcgcccgccggcacaagccg
ttcgtggcgatcaactgcgcgtcgatccccgagagtctgatcgagagtgagctgtttggt
taccgcggcggcagttttaccggcgcgcgcaaggagggcatgcgcggcaagcttgtgcag
gccgacggcggtaccttgctgctggatgagatcggcgacatgccgctggcgctgcagacc
cgcctgctgcgggtgctggaagagcgccaggtggtgcccatcggcggcgaaccccaggcg
gtggacgtgcgcatcgtcagtgccacccaccgcgacttgttggagcgggtggcgcagggc
agctttcgcgaagacctttattaccggctcaatggccttgaagtggcgctgccggcggtg
cgcgagcgcagcgacaaggggccgttgctggacttcctgctacgccaggaggcgcagggg
cagccagtggcccttgacccgagtgcccgccaggcgttgctggacttcgcctggccaggc
aacgtgcggcagatgcgcaatgtgctgcgcaccttggtggcgttgtgtgatgaaggccag
ataggtttcgaggagctgcccgcagtcatccgcagcgccccaatccctgtaggagcggcc
ttgtgccgcgaaaggggtgcgcagcgcccccaggatcatgacgacactgcggaaatcgcc
ggggctgctgcgcagccctttcgcgacacaaggccgctcctacatgccgagcgtgacgtt
ctgctcgctgtgttggaagcaaaacgctggcacctgacccaggtcgccgagcacctgggc
atcagccgcaacaccctgtatcggaaactgcgcaaacacggcatcgccagggccggctaa
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