Pseudomonas fakonensis: KSS94_04885
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Entry
KSS94_04885 CDS
T07698
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak00470
D-Amino acid metabolism
pfak00550
Peptidoglycan biosynthesis
pfak01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KSS94_04885 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KSS94_04885 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfak01011
]
KSS94_04885 (murD)
Enzymes [BR:
pfak01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
KSS94_04885 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfak01011
]
Precursor biosynthesis
Amino acid ligase
KSS94_04885 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
TrkA_N
DUF5335
Motif
Other DBs
NCBI-ProteinID:
QXH52466
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All DBs
Position
1066047..1067393
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AA seq
448 aa
AA seq
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MSLIASDQFRIVVGLGKSGMSLVRFLASRGIAFAVADTREQPPELETLRRDYPQVEVRCG
ELDVDFLCRANELYVSPGLALATPALQQAAARGVTLSGDIELFARHAKAPIVAISGSNAK
STVTTLVGDMATKAGKRVAVGGNLGTPALDLLSDEVELYVLELSSFQLETTDQLNAEVAT
VLNISEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLPVEGRPCFSFGLNPPD
FKAFGLREVDGEKYLAYEFQALMPVRELKIRGAHNQSNALAALALGYAAGLAFEPMLEAL
REFKGLAHRCQWVRERNGVNWYDDSKATNVGAALAAIEGLGADIEGQLVLIAGGDGKGAD
FAALREPAGKHCRAVVLLGRDAERLAATLDGAVPLVRVQTLDEAVQRCAELAQPGDAVLL
SPACASLDMFKNFEERGRLFAQAAEGLA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtcactgatcgcttccgaccaattccgcatcgttgtcggcctcggcaagagcggcatg
tccctggttcgcttcctggcgagccggggcattgcctttgcggtcgccgacacccgcgag
cagccgccggaactggaaaccctgcgccgtgattacccgcaggtggaagtgcgctgtggt
gagctggacgtcgacttcctgtgtcgtgccaacgagctgtacgtgagcccgggcctggcc
ctggccacacccgccctgcagcaggccgccgcgcgcggcgtgacgctgtccggcgatatc
gagctgttcgcccgccatgccaaggcgccgatcgtggcgatcagcggctccaacgccaag
agcaccgtcaccaccctggtgggcgacatggccaccaaggccggcaaacgcgtggcggtg
ggcggcaacctcggcaccccggcgctggacctgctcagcgacgaggtcgagttgtacgtg
ctggagctgtcgagcttccagctggaaaccaccgaccagctcaatgccgaagtggccacc
gtgctgaacatcagcgaagaccacatggaccgctacagcggcctgccggcctatcacctg
gccaagcaccgcattttccgcggcgcccgccaggtggtggtgaaccgccaggacgccctc
agccggccgctgccggtcgaaggccgcccgtgcttcagctttggcctcaacccgcccgac
ttcaaggccttcggcctgcgtgaagtggatggcgaaaaatacctggcctacgaattccag
gcgctgatgccggtgcgtgagctgaaaatccgcggtgcccacaaccagagcaacgccctg
gccgccctggccctgggttatgccgccggccttgcgttcgaaccaatgctcgaagccttg
cgcgagttcaagggcctggcccatcgctgccagtgggtgcgcgagcgcaatggcgtcaac
tggtatgacgattccaaggccaccaacgtcggcgcggccctggccgccatcgaaggcctg
ggcgccgatatcgaaggccaactggtgctgatcgccggcggcgacggcaagggcgccgac
ttcgccgccctgcgcgagcctgccggcaagcactgccgcgccgtggtgctgctcggccgc
gatgccgagcgcctggctgccaccctcgacggcgccgtgccgctggtgcgcgtgcaaacc
ctcgatgaagccgtgcagcgctgcgccgaactggcccagccaggcgatgccgtgctgctg
tcgccggcctgcgccagcctggacatgttcaagaacttcgaagaacgcgggcgtctgttc
gcccaggcagcggaggggctggcatga
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