Pseudomonas fakonensis: KSS94_06130
Help
Entry
KSS94_06130 CDS
T07698
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pfak
Pseudomonas fakonensis
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfak03021
]
KSS94_06130 (rapA)
Transcription machinery [BR:
pfak03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
KSS94_06130 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QXH52708
UniProt:
A0ABX8NAE3
LinkDB
All DBs
Position
complement(1338930..1341776)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFSPG
DQITHFEGWKLTVREVDDADGLLVYHGIDAQNMPRTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYNTLQHTSKQMLSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFEDAQLALVALEWLVDDEKAQDALFAAGWDLLVVDEAHHLVWHEEQASAEYALVEQL
AQVIAGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESENYRPVAEAVQELLDE
GRLSPKAHATIQGFLGAEGEALLAAVSDGDTQASARLIRELLDRHGTGRVLFRNTRAAIQ
GFPERQLHPYPLANPEQYVALPAGERAELYPEVAFQAQGETNDDERWWRFDPRVDWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATTFHEGMSILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQQHTIQLHIPYLQNSP
QERLFQWYHEGLNAFLNTCPTGNALQHQFGPRLLPLLAEGDDKAWSKLVADARGERERLE
AELHSGRDRLLELNSGGAGEGQELVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
VLKPSEKMLDASFPLGDDEGVTITYDRAQALSREDMQFLTWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLGPRVAF
ETLNDQLESVPKASANKFIQAQRDVLAQRISAGEAKILPAHEARVAEAQQRLAAEADEEL
ARLTALKAVNPSVRDSEVDAVRKQREDGLAALNKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaagccgagctcggt
cttgggaccatcctggcgcaggatggccgcctgttgaccgtgctctacccggccacaggc
gacacccgccagtactcgctacgcaacgcgccgctgacccgcgtgcgcttctcgccgggc
gaccagatcactcacttcgagggctggaagctgaccgtgcgcgaagtcgacgacgccgac
ggcctgctggtctaccacggcatcgacgcgcagaacatgccacgcaccctgcccgagacg
cagctgtccaacttcatccagttccgcctggccagcgaccgcctgttcgccgggcagatc
gacccgctggcgtggttctcgctgcgctacaacaccctgcagcacaccagcaagcagatg
ctctcctccttgtggggcctgggcggcgtgcgcgcccaacccatcgcccaccagttgcac
atcgcccgtgaagtagccgaccgtattgccccgcgcgtactgctggccgacgaagtgggc
ctgggcaagaccatcgaagcgggccttgtgatccaccgccagttgctctcgggccgcgcc
agccgcgtgctgatcctggtgccggagaacctgcagcaccagtggctggtagaaatgcgc
cggcgcttcaacctgcaggtggcgctgttcgacgccgagcgcttcatcgaaagcgatgcc
agcaacccgttcgaggacgcccagctggccctggtggccctggaatggctggtggacgac
gaaaaggcccaggacgcgctgttcgccgccggctgggacctgctggtggtcgacgaagcc
caccacctggtctggcacgaagaacaagccagcgccgagtacgcgctggttgagcaactg
gcccaggtgatcgcgggtgtactgctgcttaccgccacccctgaacagctcggccaggac
agccacttcgcccgcctgcgcctgctcgaccccaaccgtttccacgacctggccgcgttc
cgcgccgaaagcgagaactaccgcccggtggccgaagcggtgcaggagctgctcgacgaa
ggccgtctgtcgcccaaagcccacgccaccatccagggcttcctgggtgccgaaggcgaa
gcgctgctggccgccgtcagcgatggcgacacccaggccagcgcgcggctgatccgcgaa
ctgctcgaccgccacggcaccggccgcgtgctgttccgcaacacccgcgcagccatccag
ggcttccccgagcgccagctgcacccctacccgctggccaatcccgagcaatatgtcgcg
ctgccggccggcgagcgcgccgagctgtacccggaagtggccttccaggcccagggcgaa
accaacgatgacgagcgctggtggcgcttcgacccacgggtcgactggctgatcgacacc
ctgaagatgctcaagcgcaccaaggtgctggtgatctgcgcccacgccgaaaccgccatg
gacctggaagacgccctgcgcgtgcgctccggcatccctgccacgaccttccacgaaggc
atgagtattctcgagcgtgaccgcgccgccgcctacttcgccgacgaagagtttggcgcc
caggtgctgatctgctcggaaatcggcagtgaaggccgcaacttccagttcgcccaccac
ctggtgatgttcgacctgccggcccaccccgacctgctcgaacagcgcatcggccgcctc
gaccgtatcggccagcagcacaccatccagttgcacatcccgtacctgcaaaacagcccg
caagagcgcctgttccagtggtaccacgaaggcctcaacgccttcctcaacacctgcccc
accggcaacgccctgcagcaccagttcggcccacgcctgctgccgctgctggccgaaggc
gacgacaaggcctggagcaagctggtggctgatgcccgcggcgagcgcgagcgcctggaa
gccgaactgcacagcggccgtgaccgcctgctggagctcaactccggcggtgccggcgaa
ggccaggagctggtcgaagccattctggagcaggatgatcagttcgccctgcctatttat
atggaaaccctgttcgacgccttcggcatcgacagcgaagaccattcggaaaacgctctg
gtgctcaagccgagcgagaagatgctcgacgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacctacgatcgcgcccaggcgctttcgcgcgaagacatgcagttcctcacc
tgggaacaccccatggtgcagggcggcatggacctggtgctgtccggttcgatgggcaac
accgccgtggcgctgatcaagaacaaggcgctcaagcccggcaccgtgctgctggagctg
ctgtacgtcagcgaagtggtggcgccgcgcagcctgcagttgggccgctacctgccaccg
gcagcgctgcgctgcctgctggacgccaacggcaacgacctgggcccgcgggtcgccttc
gaaaccctcaacgaccagctcgaaagcgtgcccaaggccagcgccaacaagttcatccag
gcccagcgtgacgtgctggcccagcgcatcagcgccggcgaagcgaagatcctgccggcc
cacgaggcccgcgtggccgaggcccagcagcgtctggccgccgaggccgacgaagagctg
gcgcgcctgaccgcgctcaaggccgtcaacccgagcgtgcgtgacagcgaagtcgatgcg
gtgcgcaagcagcgtgaagatggcctggcagcactcaacaaggcggcgttgcggctcgag
gcaatccgcgtactggtagccggctaa
DBGET
integrated database retrieval system
