Pseudomonas fakonensis: KSS94_07000
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Entry
KSS94_07000 CDS
T07698
Symbol
mnmC
Name
(GenBank) bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
pfak
Pseudomonas fakonensis
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfak03016
]
KSS94_07000 (mnmC)
Enzymes [BR:
pfak01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
KSS94_07000 (mnmC)
Transfer RNA biogenesis [BR:
pfak03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
KSS94_07000 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
FAD_binding_3
FAD_binding_2
3HCDH_N
GIDA
Pyr_redox_2
Pyr_redox
HI0933_like
AlaDh_PNT_C
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
QXH52871
LinkDB
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Position
complement(1539401..1541365)
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AA seq
654 aa
AA seq
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MSRHHEHAQIDWDDQGRPHSRQYDDVYFAKEEGLDETLYVFIEQNQLRQRFSALAAHDCL
VIGETGFGTGMNFFCAWQLFAELAHPEARLHFVSVEKYPLTRDDLARAMQLWPHLAAYTQ
PLLAQYVAIHPGFQQFSLDGGRVTLTLMIGDALEQLPQLDARIDAWFLDGFAPAKNPDMW
TPELFTQLARLSHPGTTLGTFTTTGWVRRSLIDAGFTMKKVPGLGKKWEVMHGLFTGTPA
PLPAPWYARPAALPGPRQALVIGAGLAGSATAASLAARGWQVSVLERHDGAAREASGNPQ
GVLYLKLSAHGTALSQMILAGFGYTRRWLERLQRGHDWDGCGVLQLAFDDKEAARQGKLA
EAFDSSLLHVLAREQAEALAGVALPAGGLFYPEGGWVHPPALCQAQLNHPRITLLSHANV
LELRKADGLWQAWDGERLLASAPLMVLAGAAEVRSFAACAELALKRIRGQITRLPASEAS
RALRTVVCAEGYVAPPRGDEHTLGASFDFHSQSTTPTAAEHQSNLALLGEISPDLAARLG
AAELDPAQLEGRAAFRCTSPDYLPIVGPLADAQGFAEAYAVLGKDARQVPQLECPWLEGL
YVNSGHGSRGLITAPLCGELIAAWVSGEPLPVPRAVAEACHPNRFALRRLIRGK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccaccacgaacacgcccagatcgactgggacgaccagggccgcccccactcg
cgccaatacgacgacgtctacttcgccaaggaagagggcctggacgaaaccctgtatgtg
ttcatcgagcagaaccaactgcgccagcgcttcagcgccctggccgcgcacgactgcctg
gtgatcggcgaaaccggctttggcaccggcatgaacttcttctgcgcctggcagctgttc
gccgaactggcccaccccgaggcgcgcctgcatttcgtcagcgtcgagaaatacccgctg
acccgcgacgacctcgcccgcgccatgcagttgtggccgcacctggccgcctacacccag
ccgctgctggcgcagtacgtggccatccacccgggctttcagcagttcagcctggacggc
gggcgggtcaccctgacgctgatgatcggcgacgccctggagcaattgccgcagctcgac
gcgcgcatcgacgcctggtttctcgacggcttcgccccggccaagaaccccgacatgtgg
acacccgagctgttcacccagctggcacgcctgtcgcaccccggcaccaccctgggcacc
ttcaccaccaccggttgggtgcgccgctcgctgatcgacgccggcttcaccatgaagaag
gtgccgggcctgggcaaaaagtgggaggtgatgcacggcctgttcaccggcaccccagcc
cccctgcccgccccctggtacgcccgcccggcagccctgcccggcccgcgccaggcgctg
gtgatcggcgcgggcctggccggcagcgccacggcggccagccttgccgcacgcggctgg
caggtcagcgtgctggagcgccatgacggggcggcccgggaagcctcgggtaacccccag
ggcgtgctctacctcaagctctcggcccacggcaccgcgctttcgcagatgatcctggcc
ggcttcggctacacccgccgctggctcgagcgcctgcagcgcggccacgactgggacggc
tgcggcgtgttgcaactggcctttgacgacaaagaggccgcgcgccagggcaagctggcc
gaggcgttcgacagcagcctgctgcacgtgctggcgcgtgagcaagccgaagccctggcc
ggcgtagccctgcctgccggcgggctgttctaccccgaaggcggctgggtgcacccgccg
gcgctgtgccaggcgcaactgaaccacccacgcatcaccttgctgagccatgccaacgtg
ctggaactgcgcaaggccgatggcctgtggcaagcctgggacggcgaacggctactggcc
agcgcgccactgatggtgctggccggcgccgccgaggtgcgcagcttcgccgcctgcgcg
gagcttgcgctcaagcgcatccgcgggcagatcacccgcctgccggccagcgaagccagc
cgcgcgctgcgcaccgtggtatgcgccgaaggctacgtggcgccgccgcggggtgacgag
cacaccttgggcgccagcttcgacttccacagccagagcaccacccccaccgctgccgag
caccaaagcaacctggcgctgctgggggagatatccccagacctggccgcacgcctgggt
gccgccgaactcgacccggcacagctcgaaggccgcgcggcgtttcgctgcaccagcccg
gattacctgcccatcgtcgggccgttggcggacgcgcaagggttcgccgaggcctacgcg
gtactgggtaaagatgcgcggcaggtgccgcagctggagtgcccgtggctggaagggttg
tacgtgaacagtgggcatggctcgcgcgggctgatcaccgcgccgctgtgcggcgagctg
attgcggcgtgggtcagcggcgagccgttgccagtgccccgcgccgtcgccgaggcctgc
catcccaaccgcttcgccctgcgccgcttgatccgcggcaagtga
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