Pseudomonas fakonensis: KSS94_07860
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Entry
KSS94_07860 CDS
T07698
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KSS94_07860 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfak03400
]
KSS94_07860 (uvrB)
DNA repair and recombination proteins [BR:
pfak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KSS94_07860 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KSS94_07860 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QXH53029
UniProt:
A0ABX8N9J6
LinkDB
All DBs
Position
1730839..1732854
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRQMVEGIDAGLSHQTLLGVTGSGKTFSIANVIQQVQRPTM
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERRDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNEMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVENIAAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLVEAVEGIKEELKDRLEYLHKHNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWESVSPQTIFVSATPGPYEGEHAGRVVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEIGKRVALGERVLATTLTKRMAEDLTDYLADHDVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGKAILYADNITGSMQRAIDETERRRDKQVAFNQANGIVPKGVVKDITDIMEGATV
PGARSKKRKGQAKAAEEAARYEAELQTPGEITKRIKQLEDKMFQFARDLEFEAAAQLRDE
IGKLRERLIAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagttccagctcgtcacccgcttccagccggccggcgatcagcccgaggccatc
cgccagatggtcgagggcatcgacgccggcctttcgcaccagacgctgctcggggtgaca
ggttcgggcaagaccttcagcatcgccaacgtcatccagcaggtgcagcgcccgaccatg
gtgctggcgcccaataaaaccctggccgcgcagctgtatggcgagttcaaggcattcttc
cccaacaacgccgtcgagtacttcgtctcttactacgactactaccagccagaagcctat
gtgccgtcgtcggacaccttcatcgagaaggacgcctcgatcaacgaccatatcgagcag
atgcgcctgtcggcgaccaaggcgctgctggagcggcgcgacgcgatcatcgtcaccacc
gtgtcgtgcatctacggcctgggcagccccgagacttatctgaaaatggtcctgcacgtc
gaccgcggcgacaagctcgaccagcgcgccctgctgcgccgccttgccgacctgcagtac
acccgcaacgagatggacttcgcccgcgccaccttccgcgtgcgtggcgatgtcatcgac
atcttccccgccgaatccgatcttgaagccatccgcatcgagctgttcgacgacgaggtg
gagaacatcgccgccttcgacccgctcaccggcgaagtcatccgcaagttgccgcgtttc
accttctaccccaagtcccactacgttaccccgcgggaaaccctggtcgaggccgtggag
ggcatcaaggaagagctcaaggaccgcctggagtacctgcacaagcacaacaagctggtg
gaggcccagcgcctggagcagcgcacccgcttcgacctggaaatgatcctcgagcttggc
tactgcaacggcatcgagaactactcgcgctacctttccgggcgcccggccggtgcgccg
ccgcccacgctgtacgactacctgccggcggacgcgctgttggtgatcgacgagtcccac
gtcagcgtgccgcaggtgggggccatgtacaaaggtgaccgctcgcgcaaggaaaccctc
gtggaatacggcttccgcctgccgtcggcactggacaaccggcccatgcgtttcgatgag
tgggagtcggtcagcccgcagaccatcttcgtctccgctacccccggcccctacgagggc
gaacacgccggccgcgtggtcgagcaggtggtgcgccccaccggcctggtcgacccgcag
gttgaggtgcgcccggcgctcactcaggtggacgacctgctgtcggagatcggcaagcgc
gtggccctgggcgagcgggtactggccaccacgctgaccaagcgcatggccgaggacctt
accgattacctggccgaccatgatgtgcgagtgcgctacctgcactcggacatcgacacc
gttgagcgcgtcgagatcatccgcgacctgcgcctgggtaccttcgatgtgctggtgggc
atcaacctgctacgcgagggcctggatatgcccgaggtgtcgctggtggctattctcgac
gccgacaaagagggcttcctgcgctccgagcgctcgctgatccagaccatcggccgcgcc
gcgcgcaacctcaacggcaaggcgattctgtacgccgacaacatcaccggctccatgcag
cgtgccatcgacgagaccgagcgccggcgtgacaagcaggtggcgttcaaccaggccaac
ggcatcgtgcccaagggtgttgtcaaggacatcaccgacatcatggagggcgccaccgtg
cctggtgcgcgcagcaagaagcgcaagggccaggccaaggcagccgaggaggctgcgcgt
tacgaggccgaactgcagaccccgggcgagatcaccaagcgcatcaagcaactggaagac
aagatgttccagttcgcccgcgatctggagttcgaagctgccgcgcaactgcgcgacgag
attggcaagctgcgcgagcgcctgatcgccagctaa
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