Pseudomonas fakonensis: KSS94_08170
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Entry
KSS94_08170 CDS
T07698
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pfak
Pseudomonas fakonensis
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfak03400
]
KSS94_08170
DNA repair and recombination proteins [BR:
pfak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KSS94_08170
Archaeal homologous recombinant proteins
KSS94_08170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Tail_completion_gp17
Motif
Other DBs
NCBI-ProteinID:
QXH53079
LinkDB
All DBs
Position
complement(1798224..1799462)
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AA seq
412 aa
AA seq
DB search
MRLFHTSDWHLGQSLHGQERDFEHACFIDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVHWLDEGQLDA
ERLLIPLSNARGKVEAWCLALPFLRPAEVTGPALGDNYLQGITQVHQQLIDAALKKRKKD
QALVAISHAHMAGGSISEDSERSLIIGNAEALPARLFDKAIGYVALGHLHKPQKVNREER
IRYSGAPIPLSFAEINYPHQVLEVELQGSQLVSVEPRLVPRAVALRRVGPAPLAELLEQL
AELPVIDLLEDPNRQPWLEVRVLLDEPQPDLRQQIETALQGKAVRLVRISAEYAGSRREE
DDQQAFVELSQMTPQDLFGRAWEQAYGSAVDEQALADFAELLQDVLQEEEQP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcacacctccgactggcacctgggccagagcctgcacggccaggaacgc
gacttcgaacacgcctgcttcatcgactggctgcttggccagctgcgcctgcgccaaccc
gatgcactgttgatcgccggcgacatcttcgacaccgtcaacccgccggtcaaagcccag
gagcgcctgtacgacttcatcgtccaggcccacgagcaacagcccaagctggatatcgtg
atgatcgccggcaaccacgactccggctcgcgcatcgagctgccggcaccgttgatgcgg
cgcctgcgcacccatgccctgggccgcgtgcactggctcgacgagggccagctggacgcc
gagcggctgctgatcccactgagcaacgcccgcggcaaggtcgaggcctggtgcctggcc
ctgcccttcctgcgcccggccgaagtcaccgggcccgcgctgggggacaactacctgcag
ggtattacccaggtgcaccagcaattgatcgacgcggcgctgaaaaagcgcaagaaggac
caggcgctggtggccatcagccacgcccacatggccggcggcagcatcagcgaggactcc
gaacgcagcctgatcatcggcaacgccgaagccctgccggcgcggctgttcgacaaggcc
atcggctatgtcgccctgggccacctgcacaaaccgcagaaggtcaaccgcgaggaacgc
atccgctacagcggcgcgccgatcccgctgtcgttcgccgaaatcaactacccgcaccag
gtgctggaggtggagctgcagggcagccagttggtcagcgtcgagccgcgcctggtgccg
cgtgcggtggcgttgcgccgggtcggcccggcgccgctggccgagctgctggagcaactg
gccgagctgccggtgatcgacctgctcgaagaccccaaccgccagccctggctggaggtg
cgggtattgctggacgagccgcagcccgacctgcgccagcagatcgaaaccgccctgcag
ggcaaggccgtgcgcctggtgcgcatcagcgccgaatacgctggcagccgccgcgaagag
gatgaccagcaggccttcgtcgagctgtcccagatgaccccgcaggacctgttcggccgc
gcctgggagcaggcctacggcagcgccgtcgacgaacaggccctggccgatttcgccgag
ctgctgcaggacgtgctgcaggaagaggaacagccatga
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