Pseudomonas fakonensis: KSS94_08520
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Entry
KSS94_08520 CDS
T07698
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak00071
Fatty acid degradation
pfak00280
Valine, leucine and isoleucine degradation
pfak00310
Lysine degradation
pfak00362
Benzoate degradation
pfak00380
Tryptophan metabolism
pfak00410
beta-Alanine metabolism
pfak00640
Propanoate metabolism
pfak00650
Butanoate metabolism
pfak00907
Pinene, camphor and geraniol degradation
pfak00930
Caprolactam degradation
pfak01100
Metabolic pathways
pfak01110
Biosynthesis of secondary metabolites
pfak01120
Microbial metabolism in diverse environments
pfak01200
Carbon metabolism
pfak01212
Fatty acid metabolism
Module
pfak_M00087
beta-Oxidation
pfak_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KSS94_08520 (fadB)
00650 Butanoate metabolism
KSS94_08520 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KSS94_08520 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KSS94_08520 (fadB)
00310 Lysine degradation
KSS94_08520 (fadB)
00380 Tryptophan metabolism
KSS94_08520 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KSS94_08520 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KSS94_08520 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KSS94_08520 (fadB)
00930 Caprolactam degradation
KSS94_08520 (fadB)
Enzymes [BR:
pfak01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KSS94_08520 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KSS94_08520 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KSS94_08520 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KSS94_08520 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NfeD1b_N
SDH_protease
Motif
Other DBs
NCBI-ProteinID:
QXH53145
LinkDB
All DBs
Position
1887909..1890056
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELREAVAAIQADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFNAFEDLEVPTVAAINGIALGGGLE
MCLAADYRVMSSSAKIGLPEVKLGIYPGFGGTVRLPRLVGSDNAIEWIASGKENRAEDAL
KVGAVDAVVAPELLQAGALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVAQSLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREQAIQLGLNEASKL
LGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEGQVN
ENAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVFDATVLDVLKPVVFEQREVTDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgcctcacgctcaacgaattg
cgtgaagccgtcgccgccatccaggccgacgcttcggtcaagggcgtgatcgtcagcagc
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagttcgtcgacaacttcaagctg
cccgaggccgaactggttgccggcaacctggaagccaaccgtatcttcaatgccttcgaa
gacctcgaagtgccgaccgtcgcggccatcaacggcatcgccctgggtggcggcctggaa
atgtgcctggcggcggactaccgggtcatgtccagcagcgccaagatcggcctgccggaa
gtcaagctgggcatctacccaggcttcggcggcaccgtgcgcctgccgcgcctggtcggc
tcggacaacgccatcgaatggatcgcctcgggcaaggaaaaccgcgccgaagacgccctc
aaggtcggcgccgtagacgctgtggtggcccccgagctgctgcaggccggtgccctggac
ctgatcaagcgcgccatcagcggcgagctggactacaaggccaagcgtcagcccaagctt
gagaaactcaagctcaatgccatcgagcagatgatggccttcgagaccgccaagggcttc
gtcgcaggccaggccggcccgaactacccggccccggtcgaagccatcaagagcatccag
aaggccgccaactttggccgtgacaaggctctggaagtcgaagccgcaggatttgccaag
ctggccaagacctcggttgcgcaaagcctgatcggcctgttcctgaacgaccaggagctc
aagcgcaaggccaaggcccacgacgagatcgcccacgacgtgaagcaggccgccgtactc
ggcgccggcatcatgggtggcggcatcgcctaccagtcggcggtcaagggcaccccgatc
ctgatgaaggatatccgcgagcaagccatccagctgggcctgaacgaggcctccaagctg
ctcggcaaccgtgtggagaagggccgcctgaccccggccaagatggccgaggcactcaac
gccatccgcccgaccctgtcctacggcgacttcgccaacgtcgacatcgtcgtcgaggct
gtggtcgagaacccgaaggtcaagcaggccgtgctggctgaggtggaaggccaggtgaac
gagaacgcgatcctcgcctcgaacacctcgaccatctcgatcaacctgctggccaaggcg
ctcaagcgcccggaaaatttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagtgaagtggcggttgccaccaccgtggcc
tacgccaagaaaatgggcaagaatccgatcgtggtcaacgactgcccgggctttttggtc
aaccgcgtgctgttcccgtacttcggaggcttcgccaagctggtcagcgccggtgtcgac
ttcgtgcgcatcgacaaggtgatggagaagttcggctggcccatgggcccggcctacctg
atggacgtggttggcatcgacaccggccaccatggccgcgacgtgatggccgaaggcttc
ccggaccgcatgaaggacgaccgccgctcggccgtcgacgccctgtacgaggccaaccgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aagaaagtcttcgatgccaccgtactggacgtactcaagccggtggtcttcgagcagcgt
gaagtcactgacgaggacatcatcaactggatgatggtgccgctgtgcctggagaccgtg
cgctgcctggaagacggcatcgtcgaaaccgcagccgaagccgacatgggcctggtctac
ggcatcggtttccctccgttccgcggtggcgcgctgcgctacatcgattcgatcggggtc
gccgagttcgttgcactggccgaccaatacgccgacctggggccgctgtaccaccccact
gcgaagctgcgcgaaatggccaagaacggccagcgcttcttcaactga
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