Pseudomonas fakonensis: KSS94_10215
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Entry
KSS94_10215 CDS
T07698
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KSS94_10215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfak03021
]
KSS94_10215
Transcription machinery [BR:
pfak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KSS94_10215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_20
Sigma70_ECF
HTH_Tnp_ISL3
HTH_23
HTH_Tnp_4
GerE
HTH_40
HTH_7
HTH_10
HemN_C
HTH_38
Rv2175c_wHTH
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QXH53455
UniProt:
A0ABX8NC54
LinkDB
All DBs
Position
complement(2271420..2271920)
Genome browser
AA seq
166 aa
AA seq
DB search
MSALDQASLHQLYSENNGWLKSWLRARLGNTADAADLAQDTFVRVMTARNQVPIREPRSY
LSAIARALLIDKVRRRTIEQAYLQALALRPEPVEVSPEVRLSIIEMLVSVDALLDELGPR
TRGIFLAVQLEGLPYATVAERFGVSVTTVKNHLVRAMTRCLLVAEH
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgctcgaccaagcctctctccaccagctgtacagcgaaaacaacggctggctg
aagagctggctgcgcgcacggctgggcaataccgccgatgccgccgacctggcccaggac
accttcgtgcgggtaatgaccgcgcgcaaccaagtgcccatccgcgagccgcgcagctac
ctcagcgccatcgcccgtgcgcttttgatcgacaaggtgcgccggcgcaccattgagcag
gcctacctgcaagccctggccttgcgcccggaaccggtagaggtatcccccgaagtgcgc
ctgtcgatcatcgagatgctggtgtcggtcgatgcgctgctcgatgaactgggcccgcgc
acccgcggcatcttcctcgccgtgcaactggagggcctgccctacgctaccgtggccgag
cgcttcggggtgtcggtgaccacggtgaaaaaccacctggtgcgcgccatgacccgctgc
ctgctggtggccgaacactga
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integrated database retrieval system
