Pseudomonas fakonensis: KSS94_12095
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Entry
KSS94_12095 CDS
T07698
Name
(GenBank) DEAD/DEAH box helicase
Organism
pfak
Pseudomonas fakonensis
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXH53810
UniProt:
A0ABX8NBV3
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Position
complement(2680063..2684148)
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AA seq
1361 aa
AA seq
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MQPLSFDSLPDNCRALLYALATAFPGKGKTSLLKLLRSMGICDAAGKQLDATTLADLLQE
LREQGWVDVEQRREGQYFIVATQRRTSVLLSLLGTADSAPYLQQIAASLPALNPWQTPGA
PQALQELWLNLLSGNGAQVPHLLYLSARTLHANNWAPQHPMHLLQADPAGLELFGLLDET
VRGLLLEDHLCLHNSLLGEAHGSYQLAKQQMAHAPSPELGLQLMQQALWRGDWEALQHFG
GQYPLTLQSAQLVLRGQTTEALQRIRAWLTEQRRQTKKRKIDLHPLLNALYCLALFAEND
SQHHAALKQALVLGEKQNYGSAYTVLYKFFEQLQGNTPELSYLRSFELYGLDGLLLALAL
YWLDAPVARQQNWYTTLQDYRAQLDQLGYAWLAAEFDALIAVQFGVPRHTHDVHHQAGLK
PLAELLQRREAWQHALDALSQLKPADTPASPAAKKTTRLAWLLDLHRYSNQLEPREQKLG
AKGQWSKGRPVALRRLLEEGDRLDFLCEQDRQAISVIQACRYSYSGAEYELPPDVGLPKL
IGHPALFWQDAPDVRIELEAGHASLHLEARDGQMHLRLEPQGIVNADAYYLHKQTPTRLQ
IFTLNGDLRQIVKVIGDGLSVPQSGRAHLIEAVSAIAPLLPVHSDLPELAAQLDQEPADT
RLYAHLLPLAEGLRLQLLVRPLAESSWLRPGVGAQNVLGERDGKPLQVSRDLAGERQALQ
QVLQACPGLANANSDGQEWQLEQPQDALQVLGELHALDGNQVHCVWPEGERMRLKGRLKL
NELKLGLRAQGEWFILQGEVALDDGKVLQLRQLLELLKANPGRFLKLGEGDWLALEDTLR
KRLGELAHLADRVTDQGLRLSPLTTPLLAELAAEAGEFTADKSWQAHLQKLQSLRDYQPR
LPATLKADLRAYQHEGFTWLARLAQWGVGACLADDMGLGKTVQVLALLLQRAADGPQLVV
APTSVTLNWQAESRRFAPQLKLHLYHQQRNLDGLGPGDLVITSYGLMQQDSAAFAASQWH
TVVLDEAQAIKNAQTKRSQAVMALQSNMRVVATGTPLENHLGELWSLFRFINPGLLGSQE
SFNSRFANPIEQGDAAARRALKALIQPFILRRLKSQVLDELPARTEITYKVPLSEEEAHL
YEALRQQALDNVSESAPGAGRSFQILTEITRLRRFCCHPTLVVEQSTLPGSKLQAFTALV
EELLDNGHKALVFSQYVDHLSIVRTLLDEKRIAYQYLDGSVPAKDRERRVNAFQAGAGEI
FLISLKAGGSGLNLTAADYVIHLDPWWNPAVEDQASDRAYRIGQQRPVTIYRLVAENTIE
EQIVGLHARKRDLADSLLEGGEVSAKLDADALLALLAGGGQ
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgctcagcttcgattcactccccgacaactgcagggcgctgctctacgccctg
gcaaccgcgttccccggcaaaggtaaaacctcgctgctcaagctactgcgctccatgggt
atctgtgatgccgccggcaaacagctggatgccactacattggcagacctgctgcaagaa
ttgcgggaacaaggctgggtagacgtggagcagcgcagggaaggccaatatttcatcgtg
gcgacacagcggcgcaccagtgtgttgctcagcctgctgggcacagccgacagtgcgccg
tacttgcagcagattgccgccagcctgcccgcgctcaatccgtggcaaacccctggcgcg
ccccaggcattacaagagctgtggctcaacctgttgagcggtaacggcgcccaggtgccg
cacttgttgtatctctcggccaggacactgcacgcgaataattgggccccgcaacacccc
atgcaccttctgcaggccgaccctgcgggccttgagctgtttggcctgctggatgaaacc
gtacgcgggctgctgctggaagaccatctttgcctgcacaacagcctgctgggtgaggcg
cacggcagctatcagctggccaagcagcagatggcgcatgcgccctcccccgagcttggc
ctgcaattgatgcagcaagcgctgtggcgaggcgactgggaagcgctgcaacacttcggc
gggcagtacccgctgacactgcaaagcgctcagctggtgctgcgcggccaaaccaccgag
gcattgcaacggattcgggcctggctcaccgagcagcgcaggcagaccaaaaaacgcaag
atcgacctgcacccgctgctcaacgcgctgtactgcctggcgcttttcgccgaaaacgac
agccagcaccacgctgcactcaagcaggcactggtgctgggcgaaaagcagaactatggc
agcgcctatacggtgctctacaaattcttcgagcagctgcaaggcaatacacctgaactg
tcgtacctgcgctcattcgaactttatggcctcgatggcctgctgctggcgctcgcactg
tactggctggatgccccggtcgcacgccagcagaactggtacacgaccctgcaagattac
cgggcgcaactcgatcaactgggttacgcctggctggccgcagagttcgatgccctgatc
gcggtgcaattcggtgtacctcggcacactcacgatgtgcatcaccaagccgggctcaaa
ccactggccgagctgcttcagcgccgggaagcctggcagcatgcactcgacgccctgagc
caactcaagcccgccgacacaccggccagccccgcggccaagaagaccacccgcctggcc
tggctgttggatcttcaccgctattccaatcaactggaaccgcgcgagcagaaactgggc
gccaaggggcaatggagcaagggccgcccggtggcactcaggcggctgctggaggaaggc
gacaggctggacttcttgtgcgagcaggaccgccaggcgatcagcgtgatccaggcctgc
cgctattcctattccggggccgagtacgaactgcctcccgacgttggcctgcccaagttg
atcggccacccggcgctgttctggcaggacgcaccggacgtgcgcatcgagcttgaggct
ggccatgccagcctgcaccttgaagcgcgcgatgggcagatgcatctgcgcctcgagccg
cagggcatcgtcaatgccgacgcctactacctgcacaagcaaacgcccacccgcctgcag
atatttacgcttaacggcgacctgcgccagatcgtcaaggttatcggcgacggtctgagc
gttccgcaatcaggcagggcgcacctgatcgaggcggtcagtgcgatcgccccgctgctg
ccggtgcactcggacctgcccgagctcgccgcgcagctggaccaggagcccgcagataca
cgcctgtacgcacacttgctgccacttgccgaaggtttgcgcttgcagttgctggtgcgc
ccgctggccgagagcagttggttgcgccccggcgttggcgcgcaaaacgtgcttggcgag
cgcgatggcaagccgttgcaggtaagtcgcgacctggccggcgagcgtcaggcactgcag
caggtgctgcaggcctgccccggtcttgccaacgccaacagcgacggccaggaatggcaa
ctggaacagccccaggatgccttgcaggtactcggcgaattgcacgcactggacggcaac
caggtgcactgcgtgtggccggaaggcgaacgcatgcgcttgaaaggccgcctgaaactg
aacgaactcaagctgggcctgcgcgctcagggcgagtggttcatcctgcagggcgaggtc
gcgctcgatgacggcaaggtgctgcagctgcgccagcttctggagctgctcaaggccaac
cccgggcgcttcctcaagcttggcgaaggcgattggctggcacttgaggataccttgcgc
aagcgcctgggagagcttgcgcacctggccgaccgggtcaccgaccagggcctgcggctc
agcccgctgaccacacccctgctggccgagctggcagcagaggccggtgagttcactgct
gataaaagctggcaggcacacctgcagaaactgcaatcgctgcgcgattaccagcctcgg
ctacccgcaaccttgaaagccgatctgcgtgcctatcagcatgaaggtttcacctggttg
gcacgcctggcgcaatggggcgtaggcgcctgcctggccgacgacatgggcctgggcaag
accgtgcaggttctggccctgttgctgcagcgcgcggccgacggcccgcaactggttgtg
gcgccgacgtcggtcaccctcaactggcaggccgaaagcaggcgcttcgccccacagttg
aagctgcatctgtaccaccagcagcgcaacctggatggcctgggccccggcgacctggtc
atcaccagctacggcctgatgcaacaggacagcgcagccttcgccgccagccaatggcat
acagtggtgctggacgaagcccaggccatcaagaatgcccagaccaagcgctcacaagcg
gtcatggccttgcagtcgaacatgcgtgtggtcgccacgggtacgccattggaaaaccac
ctgggcgagctgtggagcctgttccgcttcatcaaccctggcctgctcggcagccaggaa
agcttcaacagccgcttcgccaaccccatcgaacaaggcgatgcagccgctcgacgggca
ttgaaggcgctgatccaacccttcattctgcgccgcttgaaaagccaggtgctcgacgag
ctgcccgcacgcacagagatcacctacaaggtgccgttgtccgaggaggaagcgcatctt
tacgaagcgcttcgtcaacaagccttggataacgtgtcagagtcggctcccggagcaggc
aggtcgttccagatactgacggaaatcacccgcctgcgccgcttctgctgccatccaacc
ctggtggtcgagcaatccaccctgccaggcagcaagctgcaggccttcactgccctcgtc
gaagagctgctggacaatggccacaaggccttggtgttcagccagtacgtcgatcacttg
agcatcgtgcgcaccttgctcgatgaaaaacgcattgcctaccagtacctggacggcagc
gtacctgccaaggaccgcgagcgccgggtgaacgccttccaggctggcgcgggtgagatc
ttcctgatcagcctgaaggccggcggcagcggcctcaacctgaccgccgccgactatgtg
atccaccttgacccttggtggaacccggcagtcgaggaccaggccagtgaccgcgcctac
cgcatcggccagcagcgcccggtgacgatttaccggctggttgccgaaaacaccatcgag
gagcagatcgtcggcctgcacgcgcgcaaacgagacctggctgacagcttgcttgagggg
ggtgaagtgagcgcgaagctggatgccgatgcgcttttggcgctgctggcaggcgggggg
cagtga
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