Pseudomonas fakonensis: KSS94_13085
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Entry
KSS94_13085 CDS
T07698
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pfak
Pseudomonas fakonensis
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfak03016
]
KSS94_13085
Enzymes [BR:
pfak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KSS94_13085
Transfer RNA biogenesis [BR:
pfak03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KSS94_13085
Prokaryotic type
KSS94_13085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
QXH53992
UniProt:
A0ABX8ND76
LinkDB
All DBs
Position
complement(2935398..2936357)
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AA seq
319 aa
AA seq
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MDLQFLGTSSGVPTKARNVSATAVIESAGHGWYLVDCGEGTQHQLLHSPLSVRDLRAIFI
THVHGDHCFGLPGLLASAGMSGRSEPLTLVMPAALQAWVRQSLAVSETYLPFELHIQALE
SFSTMACGNVSVSTVELSHRVPSWAYVFSERDPEPRLDTARLKADGIPAGPLWGRLARGE
AVEHEGSPLDPQAYLQPTRAPQRIIVCGDNDRPELLATVARDVDVLVHEATFTQPVIERS
QSNFGHSTAAAVAQFAEAAQVRNLVLTHFSARYQAVPGRGNSIAEIRDEALAGYHGNLTL
ARDLQRYHLGRDGVLVEAV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcagtttctgggcacctcgtccggtgtgcccaccaaggcccgcaacgtcagc
gccaccgccgtcatcgaatccgccggccacggctggtacttggtcgattgcggcgaaggc
acccagcaccagctgttgcacagcccgctatcggtgcgcgatctgcgcgccatcttcatc
acccacgttcacggcgaccactgcttcggcctgccgggactgctggccagcgccggcatg
tccgggcgcagcgagccgctgacgctggtcatgcccgccgccttgcaggcctgggtacgg
caaagcctggcggtgagcgaaacctacctgccgttcgagttgcacatacaggcactggaa
agcttcagcaccatggcctgcggcaatgtcagcgtatcgaccgtggagctgtcgcaccgg
gtgccatcctgggcctatgtgttcagcgagcgcgaccccgaaccccggctggataccgca
cgcctgaaggccgacggcatccccgccgggccgctgtggggccggctggcccgcggcgag
gcagtcgagcacgagggcagcccgctcgacccgcaggcctacctgcaacccacccgtgcg
ccgcagcgcatcatcgtctgtggcgacaacgaccgccccgagctgctggcaacggtggcc
cgggacgtggacgtgctggtgcacgaggccaccttcacccagcctgtgatcgagcgcagc
cagagcaacttcggccacagcaccgccgcggccgtggcgcaatttgccgaagcggcgcag
gtgcgcaacctggtgctcacccatttcagcgcgcgctaccaggccgtgcccgggcgtggt
aacagcatcgccgagatacgcgacgaggcgctggccgggtaccacggcaacctgaccctg
gcgcgcgacctgcagcgctatcacctggggcgtgatggggtgctggtggaagcggtctga
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