Pseudomonas fakonensis: KSS94_14565
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Entry
KSS94_14565 CDS
T07698
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak02025
Biofilm formation - Pseudomonas aeruginosa
pfak03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KSS94_14565 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KSS94_14565 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfak02044
]
KSS94_14565 (tssH)
Secretion system [BR:
pfak02044
]
Type VI secretion system
Imp/Vas secretion system core components
KSS94_14565 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_22
AAA_16
nSTAND3
NACHT
AAA_7
AAA_25
Clp_N
Sigma54_activat
TniB
NBD_SMAX1
AAA_29
Mod_r
AAA_24
Zein-binding
Hpr_kinase_C
Motif
Other DBs
NCBI-ProteinID:
QXH49176
LinkDB
All DBs
Position
complement(3297356..3299938)
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AA seq
860 aa
AA seq
DB search
MINVDLQQLIKALDAETRRDLEGCAQRCVSRGGSKILVEDLLLALLERPEGLLAKALQDA
EVDAQVLAAALQPLPEHSASRNPVFAPELVQWLQDGLMAASLELGQSQIDQAALILALLR
NLVRYAGSRYQPLLARIDAARLREYALAQRPEAAPGKPAAAGGESLLAKFTHNLTQQARD
GKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLALRIAAGEVPEALKG
VEVVALDMGLLQAGASVKGEFERRLKGVIDEVKSAPKPIIVFIDEAHTLIGAGGQAGGGD
AANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPTVGEAVTILRGLA
PVYEKSHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPESIER
LRGERAEGERQVQALRRDAEAGLSIDHDALQALESRLEQAAGEQQALEALWQEQRSLAER
LLDLRQRLAKPPVDDESFDAEQCQAELLEVHGALTDAQQRERLVSFEVCPRLVAEVISAW
TGVPLSQLAREHNAKVISFADDLRLRIRGQEQAVHALDRSMRATAAGLNKPDAPVGVFLL
VGPSGVGKTETALALSDLLYGGERFLTTINMSEFQEKHTVSRLIGAPPGYVGYGEGGMLT
EAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGVANDGEGREIDFRNTLILMTSNLASD
RISQLCEDGQRPSAQDLEAAIRPALSKHFKPALLARMRVVPYYPVGGPVLNELVQIKLGR
LGERLQRRQLGFSHCQALVEHLAQRCTQSDSGARLIDHLIESHLLPTIADRLLDAMASGE
QLSQVHATLDGDGGVVCEFG
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtcgatttgcaacagctcatcaaggcgctggacgccgaaacccgccgcgac
ctcgaaggctgcgcgcagcgctgcgtcagccgtggcggcagcaagatcctcgtcgaggac
ctgctgctggcgttgctggagcgccccgaaggcctgctggccaaggccctgcaggacgcc
gaggtggatgcccaggtgctggccgcagcgctgcagccgctgcccgagcacagcgcctcg
cgcaacccggtgtttgccccggagctggtgcaatggctgcaggacggcctgatggccgcc
agcctggagctgggccagagccagatcgaccaggccgcgctgattctggcgctgctgcgc
aacctggtgcgttacgccggcagccgctaccagccgttgctggcccgcatcgacgctgcg
cgcctgcgtgagtacgccctggcccagcgccccgaggccgccccgggcaagccggcggcg
gcaggtggcgagtcgctgctggccaagttcacccacaacctcacccagcaggcccgtgac
ggcaagctcgacccggtgttgtgccgcgacggcgcgatccgccagatggtcgacatcctc
gcccgccggcgcaagaacaacccgatcgtggtcggtgaggccggggtcggcaagaccgcc
atcgtcgaaggcctggccctgcgcattgccgccggcgaagtgcccgaggcgctcaagggc
gtcgaggtggtggccctggacatgggcctgctgcaggccggtgccagcgtcaagggcgag
ttcgagcgccgcttgaagggcgtgatcgacgaggtcaagtcggcgcccaagccgatcatc
gtgttcatcgacgaagcccacaccctgatcggtgccggtggccaggccggtggtggcgat
gccgccaacctgctcaagccagccctggcccgtggcgagctgcgcaccatcgctgcgact
acctgggccgagtacaagaagtacttcgaaaaagacccggccctggcccggcgcttccag
ccggtgcaactgcacgagcccactgtgggcgaggcggtgaccatcctgcgtggcctggcg
ccggtgtacgagaaaagccacggcatttacctgcgcgatgacgccgtggttgccgctgcc
gagctgtcggcccgttacctggctggccggcaactgccggacaaggccgtcgacgtgctc
gacaccgcctgcgcccgggtacgcatcagcctggccgccgcgcccgaaagcatcgagcgc
ctgcgtggcgagcgcgccgagggtgagcgccaggtgcaggccctgcgccgggacgccgag
gcaggcctgtcgattgaccatgacgccctgcaagcactggagagccgcctggagcaggcc
gccggcgagcagcaggcccttgaggcgctgtggcaggaacaacgcagcctggctgagcgc
ctgctcgacctgcgccagcgcctggccaagccaccggtggatgatgaaagcttcgatgcc
gaacagtgccaggccgagttactggaggtgcacggcgccctgaccgacgcccagcagcgc
gagcgcctggtcagcttcgaggtatgcccgcgcctggtggccgaggtgatcagcgcctgg
accggcgtacccctgagccagctggcccgcgagcacaacgccaaggtgatcagcttcgcc
gacgacctgcgcctgcgcattcgtggccaggagcaggcagtgcatgccctggaccgctcc
atgcgcgccaccgccgccggcctgaacaagcccgatgcgccggtgggcgtgttcctgctg
gtcggccccagcggtgtgggcaagaccgagaccgccctggcgctgtctgacctgctgtac
ggcggcgagcgcttcctcaccaccatcaacatgtccgagttccaggagaaacacaccgtt
tcgcgcctgatcggtgcaccgcctggctatgtgggttatggcgagggcggcatgctcacc
gaggcggtgcgccagaagccatattcggtggtgctgctggacgaggtggaaaaagccgac
cctgacgtgctcaacctgttctaccagatcttcgacaagggcgtggccaatgacggtgaa
gggcgcgaaatcgattttcgcaacaccctgatcctgatgacctccaaccttgccagcgac
cgcatcagccagctctgcgaagacggccagcgcccctcggcgcaagacctcgaagcagcc
attcgcccggcactgagcaagcacttcaagccggccctgctggcgcgcatgcgcgtggtg
ccgtactacccggtgggcggcccggtgctcaacgagctggtgcagatcaagcttggccgc
ctgggcgagcgcctgcaacgccgtcagctgggcttcagccactgccaggcactggtcgag
cacctggcccagcgctgcacccaaagcgacagcggcgcgcggctgatcgaccacctgatc
gagtcgcacctgctgccgaccatcgccgaccggctgctcgatgccatggccagcggcgaa
caactgagccaggtgcacgccacactggacggtgacggtggtgtggtctgtgagttcggc
tga
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