Pseudomonas fakonensis: KSS94_15910
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Entry
KSS94_15910 CDS
T07698
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KSS94_15910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfak03021
]
KSS94_15910
Transcription machinery [BR:
pfak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KSS94_15910
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
GerE
PhyR_sigma-like
HTH_11
HTH_29
HTH_28
HTH_Tnp_ISL3
HTH_7
HTH_38
HTH_31
HTH_36
HTH_Tnp_4
HTH_40
Motif
Other DBs
NCBI-ProteinID:
QXH49435
UniProt:
A0ABX8N0E5
LinkDB
All DBs
Position
complement(3614712..3615227)
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AA seq
171 aa
AA seq
DB search
MTDSSPAPEMAVDALYRQHRSWLHSWLQRRLGDSWAAADLTQDTFVRVLAAQQAQALPSL
REPRAYLLTVGRRLLVNHFQRRDLERAYLDALANLPEALVPSPEQRWLLLETLHALDELL
DGLPRPVRQAFLWSQLEGLGYAAIAERLQVSERTVKRYMAQAYEHCLLVEL
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactcaagcccagcacctgaaatggccgtagacgcgctctatcgccagcaccgt
agctggctgcacagctggttgcagcggcgcctgggtgacagttgggccgccgccgacctg
acccaggacaccttcgtgcgggtgctcgccgcccagcaggcccaggcgttacccagcctg
cgcgaaccccgggcttacctgctgaccgtgggtcggcgcttgctggtcaaccatttccaa
cgccgcgacctggagcgtgcctacctcgatgccctggccaacctgcccgaggcactggtg
ccgtcgcccgagcagcgctggctgttgctggaaaccctgcacgccctcgatgaattgctc
gatggcctgccgcgcccggtgcgccaggccttcctctggtcgcagctcgaagggctgggt
tatgccgccatcgccgagcgcttgcaggtcagcgagcgcacggtgaagcgctacatggcc
caagcctacgagcattgtctgttggtggagctgtga
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