KEGG   Pseudomonas fakonensis: KSS94_16600
Entry
KSS94_16600       CDS       T07698                                 
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
pfak  Pseudomonas fakonensis
Brite
KEGG Orthology (KO) [BR:pfak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pfak03016]
    KSS94_16600 (thpR)
Enzymes [BR:pfak01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     KSS94_16600 (thpR)
Transfer RNA biogenesis [BR:pfak03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    KSS94_16600 (thpR)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 Acb1
Other DBs
NCBI-ProteinID: QXH49568
LinkDB
Position
complement(3789538..3790080)
AA seq 180 aa
MAQDPRPCGAPFKRLFFALPVGDAQRRELARWRRGLGLRSGKPVQADNFHVTLLFLGDVD
AGQVPAICAAVERLERPAAPLRLLLDRLQVWPRPGALLLAPEHTPPALLQLVYGLQQALL
PLGVQVGNREYRPHLTLSRDYRGQPPEAGEAPEFFLSARHFTLYESRKGQYWPLAEWALG
NT seq 543 nt   +upstreamnt  +downstreamnt
atggcccaagacccacgcccctgcggcgcccccttcaagcggctgttcttcgccttgccg
gtgggcgatgcccagcgccgcgaactggcccgctggcgccgcgggctgggcttgcgcagc
ggcaagccggtgcaggccgacaactttcatgtgaccttgctgtttttgggcgatgtcgat
gccggacaggtaccggcgatctgcgcggcggtcgaacgtctggagcgaccagcggcgccg
ttgcggctgctgctcgaccggctgcaggtgtggccgcggcccggggctttgctgctggcc
ccggagcacacgccgccggccctgttgcagttggtgtatggcttgcagcaggcgctgttg
ccgttgggggtgcaggttggcaaccgtgaataccggccgcacctgacgctgtcgcgggat
taccgcggccagccaccagaggccggggaggcgccggaattcttcctcagcgcccggcac
ttcactctgtatgagtcgcgcaaggggcagtactggccgctggccgagtgggcacttggt
tag

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