Pseudomonas fakonensis: KSS94_18620
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Entry
KSS94_18620 CDS
T07698
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak03030
DNA replication
pfak03430
Mismatch repair
pfak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KSS94_18620 (dnaX)
03430 Mismatch repair
KSS94_18620 (dnaX)
03440 Homologous recombination
KSS94_18620 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfak03032
]
KSS94_18620 (dnaX)
03400 DNA repair and recombination proteins [BR:
pfak03400
]
KSS94_18620 (dnaX)
Enzymes [BR:
pfak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KSS94_18620 (dnaX)
DNA replication proteins [BR:
pfak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KSS94_18620 (dnaX)
DNA repair and recombination proteins [BR:
pfak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KSS94_18620 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
AAA_14
ResIII
TIP49
AAA_30
PIF1
AAA_18
AAA_16
AAA_19
AAA_2
TsaE
nSTAND3
AAA_7
Rad17
SKI
Herpes_Helicase
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QXH49950
LinkDB
All DBs
Position
complement(4255059..4257134)
Genome browser
AA seq
691 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSTHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMSP
ERVVEHLSHVLGAENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM
LGTLDHGQVYGVLQALLEGDARALLQAVRDLAEQGPDWNGVLSEMLNVLHRVAIAQALPE
AVDNGQGDRERVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADSDDAPRPTLKPVGISPATADPATPVAAVATVAPAAHVAEPVPAPVASEPPQPVAEPEP
EPAPAAEPEPAPQATAPEPQPEPEPEPVEEVIDLPWEEPAAAAQPQPEPVAPAPVAEPEP
APAPAFSQPDYDEPPFDPSAYNPAGMDRDDEPPADEDYYAPDGDPAGFSYLDELAEHVQE
EAPAKAPEPLPASKPATGLALQWLELFPQLPVSGMTGNIAANCTLIAAEGDDWLLHLDPG
QGALFNSTQQRRLNDALNQQLGREIRLKIELIRPEQETPAQAAARKRAERQNDAVLSIEQ
DPLIQQMIKQFGATVRQDTIEPVDALASQGQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgcccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggctttgatcaacgccctggacaaccagcgcctgcaccacgcc
tacctgttcaccggtacccgtggcgtgggcaagaccaccatcgcgcgcattatcgccaag
tgcctgaactgcgaaaccggcattacctccaccccgtgcggcacctgctcggtgtgccgg
gagatcgacgagggccgcttcgtcgacctgatcgagatcgacgccgccagccgcaccaag
gtcgaagacacccgcgagctgctcgacaacgtgcagtacgccccgagccgcgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctctcgacgcactccttcaacgccttgttg
aagaccctcgaagagccgccgccctacgtcaagttcatcctcgccaccaccgacccgcaa
aaactgccggccaccatcctgtcgcgctgcctgcagttctcgctgaagaacatgagcccg
gagcgggtagtcgagcacctgagccacgtgctcggcgccgagaacgtaccgttcgaggac
gatgccctgtggttgctgggccgcgcggccgacggctcgatgcgcgacgccatgagcctg
accgaccaggccatcgcctttggtgaaggcaaggtactggccgccgatgtacgggcgatg
ctcggcaccctcgaccacggccaggtgtacggtgtgctgcaggcgttgctcgaaggtgat
gcccgggcgttgctgcaggcggtacgcgatctggccgagcagggcccggactggaacggc
gtactgtcggaaatgctcaacgtgctgcaccgcgtggccatcgcccaggcgctgcccgag
gcggtcgacaacggccagggcgaccgcgagcgcgtgctggcgctggcccaggcgttgccg
gcagaagacgtgcagttctactaccagatgggcctgatcggccgacgcgacctgcccctg
gcgccagacccgcgtggcggcttcgaaatggtgctgctgcgcatgctggcgttccgcccg
gccgacagcgacgacgcaccacggccgacgctaaagccagtggggatcagcccggccaca
gctgatccggcaacaccggtggccgcggtggctaccgttgccccggcggcgcacgttgca
gagccagtgccggcaccggtggccagcgagccgccgcagccggttgcagaacctgagccc
gagccggcccctgctgcagagcctgagcctgcaccgcaagcgacagcgcccgagccccag
ccggaaccagagcccgagcccgtggaggaggtcatcgacctaccgtgggaagagcccgct
gccgctgcccagccgcaacccgagccggtcgcgcctgcgccagtcgccgagcccgagcct
gcgcccgcgccggctttcagccagcccgactacgacgagccgccgttcgatccgtctgct
tacaacccggcaggcatggaccgcgatgacgagccgccggcagacgaagactattacgcc
cccgacggcgacccagccggcttcagctacctcgacgagctggccgagcatgtgcaggaa
gaagcgccagccaaggcccccgagccgctgccggcgtccaagccggccacgggcctggcc
ctgcaatggctggaattattcccacagttgcctgtctcgggtatgacaggcaacatcgcc
gcgaactgtacgctgatcgccgccgagggtgacgactggctgctgcacctggacccgggc
cagggcgcgctgttcaactcgacgcaacagcgccggctcaacgatgcgctcaaccagcaa
ctgggccgcgagatccgcctgaagatcgagctgatccgccccgagcaggaaaccccggcc
caggccgccgcccgcaagcgcgccgagcgccagaacgacgctgtgctgtcgatcgagcaa
gacccgctcatccagcagatgatcaagcagttcggcgcgacggtgaggcaggatactatt
gagcctgtagacgccctggccagccagggccaataa
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