Pseudomonas fakonensis: KSS94_19715
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Entry
KSS94_19715 CDS
T07698
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KSS94_19715 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfak03019
]
KSS94_19715 (recQ)
03400 DNA repair and recombination proteins [BR:
pfak03400
]
KSS94_19715 (recQ)
Enzymes [BR:
pfak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KSS94_19715 (recQ)
Messenger RNA biogenesis [BR:
pfak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KSS94_19715 (recQ)
DNA repair and recombination proteins [BR:
pfak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KSS94_19715 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
Sigma70_r4_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QXH50159
UniProt:
A0ABX8N2D9
LinkDB
All DBs
Position
complement(4486391..4488538)
Genome browser
AA seq
715 aa
AA seq
DB search
MLEQAQRVLKDVFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLT
VVVSPLIALMDDQVATLDELGVAAAALNSTLSAEQQRDLAGRLRRGEVKMLYLAPERLVQ
PRMLDFLRGLDVSLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRT
REEIVQRLHLQGAERFLSSFDRPNIFYRIVPKESPRKQLMAFLGERRGNAGIVYCLSRKK
VDETAAFLCDQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHK
LDAMLALCEETRCRRQSLLAYFDEVLEQPCGHCDNCVDQVQTWDATEPARQALSAVFRTG
QRYGVGHLVDVLLGKDTDKIRNFGHEKLSVFGVGKSLAEAEWRSLFRQLVARGLVDIDLE
GYGGLRLSDSCRPLLRGEVNLQLRRDLKPQTTAKSSSSSGGSPASQLVRGEERELWEALR
TLRRKLAEEHSVPPYVIFPDSTLLEMLRSMPTSLSDMAQVSGVGARKLERYGQAFLEVLN
GAGGTEEAPKVVLDLRHELVSLARAGMTPVQIAGQLNCTEKNVYSLLAEAIGRQELSLEQ
ALDLPEELMMEVQDAFLDGEGELPAVSAIAPLFGARVPEGVLHCIRAALAAEFEL
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggctcagcgcgttctcaaggatgtcttcggttacgacagtttccggggc
cgccaggccgcgatcatcgaatgcgtggccaatggcggcgatgccctggtgctgatgccc
accggcggcggcaagtcgctgtgtttccaggtgccggggctgctgcgcccgggcctgacg
gtggtggtgtcgccgctgatcgcgctgatggacgaccaggtcgccaccctcgacgagctg
ggcgtggctgccgctgcgctcaactcgaccctgagcgccgagcagcaacgcgacctggcc
gggcgcctgcgccgcggcgaggtgaaaatgctctacctggcccccgagcgcctggtgcag
ccgcgcatgctcgattttttgcgtggcctggacgtgtcgctgttcgccattgacgaagcg
cactgcgtatcgcagtggggccacgacttccgccccgagtacctgcaactgggccagctg
gccgagctgttcccccatgtgccgcgcatcgccctgaccgccaccgccgacatgcgtacc
cgcgaggaaatcgtccagcgcctgcacctgcagggcgccgagcgttttctgtcgagcttc
gaccggccgaacatcttctaccgcatcgtgcccaaggagtcgccgcgcaagcagctgatg
gcgttccttggcgagcgccgcggcaacgccggcatcgtctactgcctgtcgcgcaagaag
gtcgacgaaaccgccgcgttcctctgcgaccagggcttcccggcgctgccgtatcacgcc
ggccttgccgccgagacccgcgccgccaaccagcaccgcttcctcaacgaggaagggctg
atcatggttgccaccatcgccttcggcatgggcatcgacaagcccaacgtgcgctttgtc
gcccacctcgacctgcccaagtcgctcgaggcctactaccaggaaaccggccgtgccggc
cgtgacggcctgccgtcggatgcctggatggcctatggcctgcaagacatggtgatgctc
aagcagatgctgcagaactccgaaggcgacgagcgccacaagcgcatcgagcagcacaaa
ctcgacgccatgctggcgctgtgcgaagagacccgctgccgccgccaatcgctgctggcc
tacttcgacgaggtactggagcaaccctgcgggcactgtgacaactgcgtcgatcaggta
cagacctgggacgccaccgagcctgcccgccaggccctgtcggcggtattccgcaccggc
cagcgctatggtgtgggccatctggtcgatgtgctgctgggcaaggacactgacaagatc
cgcaacttcggccacgagaagctttcggtatttggtgtcggcaagtcgctggccgaggcc
gaatggcgctcgctgttccgccaactggtggcccgcggtctggtggacatcgacctggaa
ggctacggcggcctgcgcctgtccgacagctgcaggccgctgctgcgcggcgaggtcaac
ctgcaactgcgccgcgacctcaagccgcaaaccactgccaagtcctccagcagcagtggc
ggcagcccggccagccagctggtgcgcggcgaggaacgcgagctgtgggaggccctgcgc
accctgcggcgcaagctggccgaagagcacagcgtgccgccttacgtcatcttccccgac
tcgaccctgctggaaatgctgcgcagcatgcccaccagcctcagcgacatggcccaggtc
agtggtgtgggggcgcgtaagctggagcgctatggccaggccttcctcgaagtgctcaac
ggcgccggcggcaccgaggaagcaccgaaggtggtgctcgacctgcgccatgagttggtc
agcctggcccgcgccggcatgaccccggtacagatcgccggccagctcaactgcaccgag
aagaacgtctacagcctgctggccgaggccatcggccgccaggaacttagcctggagcag
gccctggacctgcccgaggagctgatgatggaggtgcaggacgccttcctcgacggcgag
ggcgagctgccggcggtgtcggccattgccccgctgttcggcgcgcgggtacccgaaggg
gtgctgcactgcatacgtgccgcgctggcggcggagttcgaactctga
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