Pseudomonas fakonensis: KSS94_19905
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Entry
KSS94_19905 CDS
T07698
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak00061
Fatty acid biosynthesis
pfak00071
Fatty acid degradation
pfak01100
Metabolic pathways
pfak01212
Fatty acid metabolism
pfak02024
Quorum sensing
pfak04146
Peroxisome
Module
pfak_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KSS94_19905 (fadD1)
00071 Fatty acid degradation
KSS94_19905 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KSS94_19905 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
KSS94_19905 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pfak01004
]
KSS94_19905 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfak04147
]
KSS94_19905 (fadD1)
Enzymes [BR:
pfak01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KSS94_19905 (fadD1)
Lipid biosynthesis proteins [BR:
pfak01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KSS94_19905 (fadD1)
Exosome [BR:
pfak04147
]
Exosomal proteins
Exosomal proteins of breast milk
KSS94_19905 (fadD1)
Exosomal proteins of breast cancer cells
KSS94_19905 (fadD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF3710
Motif
Other DBs
NCBI-ProteinID:
QXH50194
LinkDB
All DBs
Position
complement(4537837..4539534)
Genome browser
AA seq
565 aa
AA seq
DB search
MIEHFWKDKYPAGITADINPDEFPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYTLSG
AFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTQVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYN
LPNAVRFNDALALGKGGAVTEANPQPNDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR
ALMGANLHEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLPAMVKELGKWK
FSGFVGLNTLFVALCNNEAFRSLDFSSLKITLSGGMALQLSVAERWKAVTGCAICEGYGM
TETSPVAAVNPAEANQVGTIGIPVPSTLCKVIDDNGQELPLGEVGELCVKGPQVMKGYWQ
REDATAEILDSNGWLKTGDIALIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPG
VLQCAAIGVPDEKSGEVIKVFIVVKPGMTLTKEQVMEHMRANVTGYKVPKAIEFRDALPT
TNVGKILRRELRDEELKKQGLKKIA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaacatttttggaaggataagtacccagccgggatcacggcggacatcaatcct
gacgaattccccaatatccaggccgtactcaagcaatcctgccaacgttttgccgacaaa
cctgcctttagcaacctgggcaagaccatcacctacggtgaactgtacacgctgtccggc
gccttcgccgcctggctgcagcagcacaccgacctcaagcctggcgatcgcatcgccgtg
caactgcccaacgtcctgcaataccctgtcgccgtgttcggtgccatgcgcgccggcctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccagttcaacgac
tccggcgccaaggcactggtgtgcctggccaacatggcccacctggcagagaaggtcgta
cccaagacccaggtcaagcacgtcattgtcaccgaagtggccgacctgctgccaccgctc
aagcgcctgctgatcaacagcgtcatcaagtatgtgaaaaagatggtgccggcctacaac
ctgcccaacgccgtgcgcttcaatgatgcgctggccctgggcaagggcggggcggtcacc
gaggccaacccgcagcccaacgacgtggcggtgctgcagtacaccggcggcaccaccggg
gtggccaagggcgccatgctcacccaccgcaacctggtggccaacatgctgcagtgccgc
gcgctgatgggcgcgaacctgcacgaaggctgcgagattctcatcaccccgctgccgctg
taccacatctatgcgttcaccttccattgcatggccatgatgctgatcggcaaccacaac
gtgctgatcagcaacccgcgcgacctgccggccatggtcaaggaactgggcaagtggaag
ttcagcggtttcgtcggcctgaacaccttgttcgttgcgctgtgcaacaacgaggcgttt
cgcagcctggacttctcctcgctgaaaatcaccctgtccggcggcatggccctgcaactg
agcgtggccgagcgctggaaggcggtcaccggctgcgctatctgcgaaggctacggcatg
accgagaccagcccggtggcggcggtcaacccggccgaggccaaccaggtcggcaccatc
ggtattccggtgccctcgacgctgtgcaaggtcatcgacgacaacggccaggaactgccc
ctgggcgaagttggcgagctgtgcgtgaagggcccgcaggtaatgaagggctactggcag
cgtgaagacgccaccgccgagattctcgacagcaatggctggctgaagaccggcgatatc
gcgctgatccagccggacggctacatgcgcattgtcgaccgcaagaaggacatgatcctg
gtgtcgggcttcaacgtgtacccgaacgagctcgaagacgtgctcgccgcgctgccgggc
gtgctgcagtgcgccgccatcggcgtaccggatgaaaagtccggcgaggtgatcaaggtg
ttcatcgtggtcaagccgggcatgaccctgaccaaggagcaggtgatggagcacatgcgc
gccaacgtcaccggctacaaggtgcccaaggccatcgagttccgcgacgcgctgccgacc
accaacgtcggcaagatcctgcgccgcgagctgcgtgacgaagagctgaagaagcagggc
ctgaagaagatcgcctga
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