Pseudomonas fakonensis: KSS94_23325
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Entry
KSS94_23325 CDS
T07698
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak00260
Glycine, serine and threonine metabolism
pfak00460
Cyanoamino acid metabolism
pfak00630
Glyoxylate and dicarboxylate metabolism
pfak00670
One carbon pool by folate
pfak00680
Methane metabolism
pfak01100
Metabolic pathways
pfak01110
Biosynthesis of secondary metabolites
pfak01120
Microbial metabolism in diverse environments
pfak01200
Carbon metabolism
pfak01230
Biosynthesis of amino acids
pfak01240
Biosynthesis of cofactors
pfak04981
Folate transport and metabolism
Module
pfak_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KSS94_23325
09102 Energy metabolism
00680 Methane metabolism
KSS94_23325
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KSS94_23325
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KSS94_23325
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KSS94_23325
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KSS94_23325
Enzymes [BR:
pfak01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KSS94_23325
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QXH50841
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Position
5288528..5289781
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AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDAELFEAMQQEALRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDGNGLIDYDEVERLALEHKPKMIVAGFSAYSQV
LDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAQAMAEV
FIERGFDVVSGGTQNHLFLLSLIKQEISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECRELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYSN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgaccattgccaagtacgacgccgagctcttcgaagccatgcag
caagaagccctgcgccaggaagagcatatcgagctgatcgcttcggagaactacacaagc
ccagcagtcatggaagcccaaggctcggtcctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggtggttgcgagtacgtcgacgtggtcgagcaactggccatcgac
cgtgccaaggagctgttcggcgccgactacgccaacgtccagccgcacgcaggctcgcaa
gccaacgctgcggtctacctggccctgctgtcggccggtgacaccatcctgggcatgagc
ctggcccacggcggccacctgacccacggtgccagcgtttcgtcctcgggcaagctgtac
aacgccatccagtacggcatcgacggcaacggcctgatcgactacgacgaagtcgagcgc
ctggcgctcgagcacaagccgaaaatgatcgtcgccggcttctcggcctactcgcaggtg
ctggacttcgcacgcttccgtgccatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccacgtggccggcctggtagccgccggcgtgtacccgaacccggtaccgttcgcc
gacgtggtcaccaccaccacccacaagaccctgcgcggcccgcgcggcggcctgatcctg
gcccgtgccaacgccgacatcgagaagaagctgaactctgcagtcttcccgggcgcccag
ggcggcccgctggagcacgtcatcgccgccaaggccatctgcttcaaggaagccctgcag
cctgagttcaaggcttaccagcagcaagtagtgaagaacgcccaggccatggccgaagtg
ttcatcgagcgtggcttcgacgtcgtctccggcggcacccagaaccacctgttcctgctg
tcgctgatcaagcaggaaatctccggtaaggacgctgacgccgctctgggcaaggccttc
atcaccgtcaacaagaactcggtgccaaacgacccacgttcgccgttcgtgacctcgggc
ctgcgtttcggcaccccggccgtgaccacccgtggtttcaaagaggccgagtgccgcgag
ctggcaggctggatctgcgacatcctggccgacctgaacaacgaagcggtgatcgacgcc
gtgcgtgagaaggtcaaggccatctgcaagaagctgccggtttacagcaactga
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