Pseudomonas fakonensis: KSS94_25380
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Entry
KSS94_25380 CDS
T07698
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KSS94_25380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfak03400
]
KSS94_25380
Enzymes [BR:
pfak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KSS94_25380
DNA repair and recombination proteins [BR:
pfak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KSS94_25380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_16
Zn_ribbon_6
AAA_30
iSirtuin
TrwB_AAD_bind
Zn_ribbon_LysW
AAA_19
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QXH51226
LinkDB
All DBs
Position
5762047..5764266
Genome browser
AA seq
739 aa
AA seq
DB search
MSDVILRLALPSPLRRLFDYRAPASMARQALTPGMRIRVPFGRREMIGVLVEVAQSSEVP
ADKLKPAVALLDPVSPIPPALFKLCLWTAQYYQHSLGDTLSWALPTLLRQGEAAEARQER
FWHVAPGARLEDPRIARAPRQREALKTLSQHPHGVAHSLLGKLGLNKDSLDLLLAKDLVS
IEVRRHLPTARHEHWLAQPELPLNEEQRAAFEAVRSGFGAFHAFLLAGVTGSGKTEVYLQ
LIRETLEAGKQALILIPEINLGPQTLQRFEQRFNARIALLHSAVADRERLDAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLAVVRAHQENIPILLGS
ATPSLESLHNAHSGRYGLLRMNQRAGGARAPRFLRLDVRSLPLDSGISGPLQQAIRQTLE
AGQQVLVFLNRRGFAPTLLCHDCGWLSECPRCDARMTVHQRSAVLRCHHCGYDEHLPLQC
PQCAHVDLRPVGAGTERAEERLKVLFPDYPILRVDRDSTSRKDAMHNLFTTIQRGQPSIL
VGTQMLAKGHHFPRVTLVAILDADGGLFSGDFRAGERMAQLIVQVAGRAGRAEEPGKVIV
QTHLADHPLLVQLTEQGYFAFAEQALSERRAAGLPPFAHLALLRADAHKPGQAEGFLDEA
CAAAERLLNEQRLQGIELLGPVPAPMERRAGRFRAQLLLQANARAHLHRLISAWLLVLEQ
MPSGRQVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacgtcatcctgcgccttgccctaccctcgccgctacgtcgcctgttcgactac
cgggccccggcgagcatggcgcgccaggcactgaccccgggcatgcgcatccgcgtaccg
tttggccgccgcgagatgatcggcgtgctggtagaagtggcgcaaagcagcgaagtgccc
gccgacaagctcaagcccgccgtcgccctgctcgacccggtgtcgccgattccgccggcg
ctgttcaagctgtgcctgtggactgcgcagtactaccagcacagcctcggcgacaccttg
agctgggccctgccgaccctgctgcgccagggcgaggccgccgaagcccgtcaggagcgc
ttctggcacgtggcccccggcgcacgcctggaagacccgcgcattgcccgcgcaccgcgc
cagcgcgaggcgctcaagaccttgtcgcaacacccccacggcgtggcccacagcctgctg
ggcaagctcggcctgaacaaggacagcctggacttgctgctggccaaggacctggtgagc
atcgaggtacgccgtcacctgccgacggcgcgccacgagcattggctggcgcagccggag
ttgccgctcaacgaggagcaacgcgccgccttcgaggccgtgcgctcgggcttcggggcg
ttccacgcctttttgctcgccggggtgactggcagcggcaagaccgaggtctacctgcaa
ctgatccgcgaaaccctcgaggccggcaagcaggcgctgatcctgatccccgagatcaac
ctcgggccacagaccctgcagcgcttcgagcagcgcttcaacgcacgcatcgccctactg
cactcggcggtggccgaccgcgagcgcctggacgcctggctggcggcgcgcgacggcgag
gccgacatcatcatcggcacccgttcggcgctgttcacgccgatgaaaaaccccggcctg
atcatcatcgatgaagagcacgacggctcctataaacagcaggaaggcctgcgctaccac
gcccgcgacctggcggtggtgcgcgcgcaccaggagaacattccgatcctgctgggctcg
gccaccccgtcgctggagagcttgcacaacgcccacagcggccgctacggcctgctgcgc
atgaaccagcgcgctggtggcgcccgcgccccgcgcttcttgcgcctggacgtgcgcagc
ctgccgctggacagcggcatcagcggcccgctgcaacaggccattcggcagacgctggag
gccggccagcaggtgctggtgttcctcaaccgacgcggcttcgcccccaccctgctgtgc
cacgactgcggttggctcagcgaatgcccgcgctgcgacgcgcgcatgaccgtgcaccag
cgttcggcggtattgcgctgccaccactgcggctatgacgaacacctgccgctgcaatgt
ccgcagtgtgcccacgtcgacctgcgcccggtgggcgccggtacagagcgtgccgaagaa
cgcctgaaagtgctgttcccggactacccgatcctgcgtgtggaccgcgacagcacctca
cgcaaggacgccatgcacaacctgttcaccaccatccagcgcggccagccgagcattctg
gtgggcacccagatgctggccaaggggcatcacttcccgagggttaccctggtggccatc
ctcgatgccgacggcgggctgttctccggggattttcgcgccggcgaacgcatggctcag
ctgatcgtgcaggtggcgggccgtgcaggccgcgccgaagaacccggcaaggtgatcgtg
cagacccacctggctgaccacccgctgctggtgcaattgaccgaacagggctacttcgcc
ttcgccgagcaggccctgagcgagcgccgcgccgccggcctgccgcccttcgcccacctg
gccctgctgcgcgccgatgcgcacaagccggggcaggccgagggtttcctcgacgaagcc
tgcgcggcagccgagcggctgctgaacgaacagcgcctgcagggcatcgaactgctgggc
ccggtaccggcgccgatggagcgacgggcggggcgttttcgcgcacaactgttgcttcag
gccaatgcccgggcgcacttgcatcgactgatcagtgcctggttgctagtgttggaacag
atgccttccgggcggcaggtgcgctggtcgctggatgtggacccggtggatctttactga
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