Pseudomonas fakonensis: KSS94_25940
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Entry
KSS94_25940 CDS
T07698
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak00250
Alanine, aspartate and glutamate metabolism
pfak00310
Lysine degradation
pfak00350
Tyrosine metabolism
pfak00650
Butanoate metabolism
pfak00760
Nicotinate and nicotinamide metabolism
pfak01100
Metabolic pathways
pfak01120
Microbial metabolism in diverse environments
Module
pfak_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
KSS94_25940 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KSS94_25940 (gabD)
00310 Lysine degradation
KSS94_25940 (gabD)
00350 Tyrosine metabolism
KSS94_25940 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
KSS94_25940 (gabD)
Enzymes [BR:
pfak01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
KSS94_25940 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
KSS94_25940 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
KSS94_25940 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
QXH51334
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Position
complement(5885763..5887205)
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AA seq
480 aa
AA seq
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MQLKDAQLFRQQAFINGEWLDADSGQTIKVTNPATGEVIGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERAGKLRRWFELMIEHQDDLARLMTTEQGKPLAEAKGEIAYAASFIEWFA
EEAKRVYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPYSALALVELATRAGIPAGVLSVITGSAGEVGSELTGNSLVRKLSFTGSTEIGRQ
LMEECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRIYVQDG
VYDAFAEKLAAAVAKLKIGNGLEEGTTTGPLIDGKAVAKVQEHIQDAVSKGAKVLSGGKL
IEGNFFEPTILVDVPKTAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYARD
MSRVFRVAEALEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLSI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcaaagacgctcagttgttccgccagcaagccttcatcaacggtgagtggctg
gatgcggacagcggtcagaccatcaaggtgaccaacccggccaccggtgaagtgatcggt
accgtgccgaagatgggcgccgccgaaacccgccgcgccatcgaggccgccgacaaggcc
ctgccggcctggcgtgcactgaccgccaaagagcgtgccggcaagctgcgccgctggttc
gagctgatgatcgagcaccaggacgacctggcccgcctgatgaccaccgagcagggcaag
ccactggccgaagccaagggcgaaatcgcctacgccgcctcgttcatcgaatggttcgcc
gaagaagccaagcgcgtttacggcgatgtcatcccgggccaccagccagacaagcgcctg
atcgtcatcaagcagccgatcggtgttaccgctgccatcaccccgtggaacttcccggcg
gcgatgatcacccgtaaagccggcccggctctggccgccggttgcaccatggtgctcaag
cctgcttcgcagaccccgtactccgccctggccctggtcgagctggctacccgtgccggc
atcccggctggcgtgctcagcgtcatcaccggcagcgccggcgaagtcggttcggaactg
accggcaactccctggttcgcaagctgtccttcaccggctccaccgaaatcggccgccag
ctgatggaagaatgcgccaaggacatcaagaaggtttcgctggagctgggtggcaacgcc
ccgttcatcgtgttcgacgacgccgacctggacaaggcggtcgagggcgcgatcatctcc
aagtaccgcaacaacggccagacctgcgtctgcgccaaccgtatctacgtacaggacggc
gtctacgatgcgttcgccgagaagctggccgctgcagttgccaagctgaagatcggtaac
ggcctggaagaaggcaccaccaccggcccgctgatcgacggcaaggccgtggccaaggtc
caggagcacatccaggacgcggtctccaaaggcgccaaggtgctgtctggcggcaagctg
atcgaaggcaacttcttcgagccgaccattctggtcgacgtgccgaaaaccgccgctgtc
gctaaagaagagaccttcggcccgctggcgccgctgttccgcttcaaggacgaggctgaa
gtcatcgccatgtccaacgacaccgagttcggcctggcctcgtacttctacgcccgcgac
atgagccgtgtgttccgcgtcgccgaagccctggaatacggcatggtgggtatcaacacc
ggcctgatctccaacgaagtggcaccgttcggtggcatcaaggcctcgggcctgggccgc
gaaggttccaagtacggcatcgaggactacctcgaaatcaaatacctgtgcctgagcatc
tga
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