Pseudomonas fakonensis: KSS94_26165
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Entry
KSS94_26165 CDS
T07698
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak00300
Lysine biosynthesis
pfak00470
D-Amino acid metabolism
pfak01100
Metabolic pathways
pfak01110
Biosynthesis of secondary metabolites
pfak01120
Microbial metabolism in diverse environments
pfak01230
Biosynthesis of amino acids
Module
pfak_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KSS94_26165 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KSS94_26165 (dapF)
Enzymes [BR:
pfak01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KSS94_26165 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
SPO11_like
Motif
Other DBs
NCBI-ProteinID:
QXH51377
UniProt:
A0ABX8N5Z0
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All DBs
Position
5929158..5929988
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRNTGVGFDQLLIVEAPSNPEVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKGGIIELDVRNDGQVCVDM
GPPRLAPAEIPFVADQQALSYPLEVDGQVYPIAAVSMGNPHSVLRVDDINSAPVHELGPK
IEHHPRFPQRVNAGFIQVIDRHRANLRVWERGAGETQACGTGACAAAVAAIAQGWMDSPV
SIDLPGGRLSIEWGGPGKPVLMTGPAVRVFEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacgggctgggcaacgacttcatggtcctcgacctg
gtcagccagcacgcgcacatccagcccaagcacgccaagcaatggggtgaccgcaacacc
ggcgtcggcttcgaccagctgctgatcgtcgaggcgccgagcaaccccgaggtcgacttc
cgctaccgcattttcaacgccgacggttcggaagttgaacagtgcggcaacggcgcgcgc
tgcttcgcccgcttcgtgctggacaagcgcctgaccgccaagaagcgcattcgcgtcgaa
accaagggcggcatcatcgagctggacgtacgcaacgatggccaggtctgtgtcgacatg
ggcccgccgcgcctggcgccggccgaaatccccttcgtcgccgaccagcaggcgctgagt
tacccgctggaagtcgacggccaggtctacccgatcgccgccgtgtccatgggcaacccg
cactcggtgctgcgcgtcgacgacattaacagcgcaccggtgcatgaactggggccgaaa
atcgagcaccacccgcgcttcccgcagcgggtcaatgccggcttcatccaggtgatcgac
cgccaccgcgccaacctgcgggtttgggagcgcggtgccggtgaaacccaggcctgcggt
accggcgcctgcgccgctgccgtggcagccatcgcccagggctggatggactcgccagtg
tccatcgacctgccgggcgggcgcctgagtatcgaatggggcggcccaggcaaaccggtg
ttgatgaccggccctgccgtacgcgttttcgaaggacaggttcgtctctaa
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