Pseudomonas fakonensis: KSS94_26860
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Entry
KSS94_26860 CDS
T07698
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak03420
Nucleotide excision repair
pfak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KSS94_26860 (uvrD)
03430 Mismatch repair
KSS94_26860 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfak03400
]
KSS94_26860 (uvrD)
Enzymes [BR:
pfak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KSS94_26860 (uvrD)
DNA repair and recombination proteins [BR:
pfak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KSS94_26860 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
KSS94_26860 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
AAA_22
DUF5681
Motif
Other DBs
NCBI-ProteinID:
QXH51510
LinkDB
All DBs
Position
6083403..6085586
Genome browser
AA seq
727 aa
AA seq
DB search
MHTDDLSLLLNSLNDAQRQAVAATLGRQLVLAGAGSGKTRVLVHRIAWLIQVEGASPHSI
LSVTFTNKAAAEMRQRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLVQNFQILDSD
DQQRLIKRVMREMGLDEQKWPARQAQWFINGQKDEGLRPRHIQAGGDLFLGTMRDIYANY
EQACERAGVIDFSELLLRALDLWRDQPGLLEHYQRRFQHILVDEFQDTNAVQYAWLRLLG
AGGRSLMAVGDDDQSIYGWRGAKIENIHQYTADFPDAEMIRLEQNYRSTGGILKAANALI
ANNSGRLGKELWTDMGEGEPLTLYAAYNEHDEARYVVETIESLVKQGNARNEIAILYRSN
AQSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPPRG
IGEKTVEAIRDHARHAQLSMWQAMCQLLAAKALKGRAASALGAFIELIENLASKVADMPL
HLMTQTVIEQSGLIIYHQEEKGEKGQARVENLEELVSAARNFETSEEDADLSPLSAFLGH
ASLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERR
LAYVGITRAMRQLIMTYAETRRLYGSETYNKVSRFVREIPAGLVQEVRLSNTVSRPFGGA
KAPASSLFANANIPQTAFNLGQRVQHAVFGEGVILNFEGSGAQARVQVNFDEGSKWLMLG
YAKLEAL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcataccgatgacctctccctcctgctgaactccctcaacgacgcccaacgccaggcc
gtagcggccacgctggggcgccaactggtgctggccggcgccggctccggcaagacccgc
gtgctggtgcaccgcatcgcctggctgatccaggttgaaggggcctcgccgcactcgatc
ctgtcggtgacctttaccaacaaagccgccgccgaaatgcgccagcgtatcgagcaactg
ctgggtatcaacccggccggcatgtgggtgggcaccttccacggcctggcccaccgcctg
ctgcgcgcgcactggcaggaagccgggctggtgcagaacttccagatcctcgacagcgac
gaccagcagcgcctgatcaagcgggtcatgcgcgaaatgggcctagatgagcaaaaatgg
ccggcccgccaggcccagtggttcatcaacgggcagaaggacgaaggcctgcgcccgcgc
catatccaggccggcggcgacctgttcctgggcaccatgcgcgacatctacgccaactac
gagcaagcctgcgagcgcgccggggtcatcgacttctccgaactgctgctgcgtgccctc
gacctgtggcgcgaccagcccggtttgctggagcactaccagcgccgcttccagcacatt
ctggtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcctgctcggt
gccggcgggcgcagcctgatggcggtgggcgacgacgaccagtcgatctacggctggcgc
ggcgccaagatcgagaacatccaccagtacacggcagacttccccgacgccgagatgatt
cgcctggagcagaactaccgctccaccggcggcatcctcaaggccgccaacgccttgatc
gccaacaacagcgggcgcctgggcaaggagctgtggaccgacatgggcgaaggcgagccg
ctgacgctgtatgccgcctacaacgagcacgacgaagcgcgctacgtggtcgagaccatc
gaaagcctggtcaagcagggcaatgcgcgcaacgaaatcgccatcctgtaccgctccaac
gcccagtcgcgggtgcttgaagaagcgctgctgcgcgaacgcatcccgtaccgcatctat
ggcggccagcgcttcttcgagcgcgccgaaatcaagaacgccatggcttacctgcgcctg
ctcgaaggccgtggcaacgacgctgcactggagcgggtgatcaacgtgccgccacgcggc
atcggcgaaaaaaccgtcgaagccatccgcgaccacgcccgccacgcgcagctgtcgatg
tggcaggccatgtgccagctactggctgccaaggccctcaagggccgcgccgccagcgcc
ctgggtgcgttcatcgagctgatcgagaacctcgccagcaaggtcgccgacatgccgctg
cacctgatgacccagacggtcatcgagcagtccgggctgatcatctaccaccaggaagaa
aagggcgaaaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgcgcgc
aacttcgaaaccagcgaagaagacgccgacctgtctccgctgtcggcgttcctcggccac
gcctcgctcgaggccggcgacacccaggccgacgagcacgaagacagcatccagctgatg
accctgcacagcgccaagggcctggagttcccctacgtgttcctggtgggcatggaggaa
gggctgttcccgcacaagatgagcctggaagaacccggccgccttgaagaggaacgccgc
ctggcctacgtcggcatcacccgtgccatgcgccagctgatcatgacctacgccgagacc
cgccggctgtacggcagtgaaacctacaacaaggtgtcgcgcttcgtacgggagatcccg
gccgggctggtacaggaagtgcgcctgtcgaacaccgtcagccgcccgttcggcggcgcc
aaggcgccggccagcagcctgttcgccaacgccaacattccgcagaccgccttcaacctt
ggccagcgcgtgcagcatgcggtgttcggcgagggtgtgatcctcaacttcgaaggctcc
ggcgcccaggcccgagtgcaggttaacttcgacgaaggcagcaagtggctgatgcttggc
tacgccaagcttgaggccttgtag
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