Pseudomonas synxantha LBUM223: VO64_0361
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Entry
VO64_0361 CDS
T03769
Name
(GenBank) KaiC
KO
K08482
circadian clock protein KaiC
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
VO64_0361
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Rad51
DnaB_C
RecA
MEDS
AAA_16
NPHP3_N
AAA_5
nSTAND3
IstB_IS21
PAXNEB
CbiA
AAA_22
SLFN-g3_helicase
AAA_19
PhoH
AAA_11
AAA_24
ResIII
AAA_30
AAA_7
AAA
Sigma54_activat
NACHT
GvpD_P-loop
AAA_14
Nop5_56-rel_N_Arc
DAP3
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AKA80907
UniProt:
A0AAU8TSI7
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Position
409145..410644
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AA seq
499 aa
AA seq
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MSTSKELFSEKAATGIEGLDDILAGGLSRSHLFLLEGEPGTGKTTVALHFLQAGAQNGER
CLYITLSETERELRQGAKSHGWDLDDNIFIFELTPPESLLNAEHQQSLLYSSDLELGEAT
RQIFEVVERVKPTRVVVDSLSEIRLLAQSSLRYRRQILAIKHYFVRYDATVLLLDDLTTE
SLDKTVHSVAHGVIRLEELTPNYGAERRRVRVVKYRGQKYRGGFHDFTIMGDGIHVFPRL
VAAEHRGGYNRQTLTSGIQELDSLLGGGIETGSSSLILGPAGTGKSLISMIFAAAAVARG
EKAALFIFDEELGLLFERMKNMGIDLAALQDTGNLLIEQVDAAELSPGEFSHRVRRCVDE
GGIKTVVIDSINGYQAAMPEENALILHMHELLLYLNRRGAATFMTVAQHGLVGDMQTPVD
ITYLADTVILLRYFEALGKVRRAISIIKKRTGSHESTIREYRIGGRGMTVGEPLDNFQGV
LRGIPIYMGAGSPLLKDEG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
ttgtctacatccaaagagctgttcagtgaaaaggcggccaccggcatcgaaggtcttgat
gacattcttgccggaggcctatcgcgcagccatctgttcctcctggaaggcgaacccggc
accggtaaaaccaccgtggcgttgcacttcctgcaggccggcgcgcaaaacggtgaacgc
tgcttgtatatcaccctgtcagaaactgagcgcgaattgcgccagggtgccaagtcccat
ggctgggacctggatgacaatatctttattttcgaattgaccccaccggagagcctgctc
aacgccgagcaccagcaaagcctgctgtattcctccgacctcgaactgggtgaagccacc
cgccagatttttgaagtggtggaacgggtcaagccgacccgcgtggtggtcgacagtctc
tcggaaatccgcctgctggcgcagagttccctgcgctaccgccggcagatcctggcgatc
aagcattacttcgtgcgctatgacgcgactgtattactgttggatgacctgaccaccgaa
tccctggataagactgtgcacagcgtggcccacggagtcattcgccttgaagaactgacc
cccaactacggcgccgagcgccgccgcgtacgggtggtgaaataccgcggccagaaatac
cgtggaggctttcatgacttcaccatcatgggcgacggcatccacgtgttcccgcgcctg
gtggcggctgagcatcgtggcggatacaaccgccagacattgaccagtggcatccaggag
ctggattcgctgctcggcggcggcattgagaccggttccagcagcctgatccttggcccg
gcgggtaccggcaagtccctgatctcgatgatcttcgccgccgccgccgtagcccggggc
gaaaaggccgcactgttcatcttcgatgaagaactgggcctgctgttcgagcgtatgaaa
aatatgggcatcgatctcgcggcgttgcaagacaccggcaacctgctgatcgagcaggtc
gacgccgctgagttgtcgcccggcgaattctcgcaccgggtacgtcgctgcgtggatgaa
ggcggcatcaagactgtggtcatcgacagtattaacggctaccaggctgccatgccggaa
gagaacgcgctgatcctgcacatgcatgaactgctgctgtacctcaaccgccgcggtgcc
gcgaccttcatgaccgtggcccagcatgggttggtcggcgatatgcaaacccctgtggac
attacctacctggccgataccgtgattctgctgcgctattttgaagccctgggcaaagtc
cgccgggccatttcaatcatcaagaaaagaaccggctcccatgagtcgaccattcgtgaa
taccgcatcggtggccgaggcatgacggttggtgagccgctggacaacttccagggtgta
ctgcgcggcattccgatttacatgggcgccggttccccactgctaaaggatgagggctag
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