Pseudomonas synxantha LBUM223: VO64_0397
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Entry
VO64_0397 CDS
T03769
Name
(GenBank) Rtn protein
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
VO64_0397
Enzymes [BR:
pfb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VO64_0397
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GFIT
Motif
Pfam:
EAL
CSS-motif
ATP-synt_I
CSS_CxxC
IMPDH
Motif
Other DBs
NCBI-ProteinID:
AKA80943
UniProt:
A0AAU8TDV9
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Position
453524..455065
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AA seq
513 aa
AA seq
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MPLTAKGPRSRAARYFISTLCGLLPVLLGFAILYWQAERTLEQSTAQTAQEAVRQFDLML
DNTALAAQALLPWAGKPCDSEAQLALREQVTRRPFVRATTLSWQKNIYCSSLFGGNSQSP
VNPDDYVNGRLWLMNGNPVTPDTALLVYRLVEGDQGAFASIDSYHLTNALRLISRYAHLV
LQVGPHWLDADGKVHDRAVPEFAVAHHHLASERYDYSVEAGMPEGETWRYMQARYPALFS
LVVFFGVLASILAHWLQKRSSAPTQELQRALSANEFIPYFQPVVRGDTRQWAGCEVLMRW
KHPKEGLVRPDLFIPLAEDSGLIVPMTRALLRQTAAQLAPHAARFSPGFHIGVNITARHC
QDLALVEDCREFLAAFAPGQVSLVLELTERELIEPTDITRQLFDALHQLGVLIAIDDFGT
GHSSLAYLRNFNVDYLKIDQSFVAMIGADALSGHILDSIIELSGKLDLGIVAEGVETAQQ
CEYLVAQGVDFLQGYLFGRPLPCDEFINSLGNP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgaccgccaaaggtccaagaagccgagctgcccgctatttcatcagcaccctc
tgcgggctgctgcccgttctgctggggtttgcaattctttactggcaagccgagcgcacg
cttgagcaaagcacggcccaaaccgctcaagaagcggtgcgccagttcgacctgatgctc
gacaataccgccctcgccgcccaggctttgttgccttgggcgggtaagccatgtgacagc
gaggcgcaactggcgctgcgcgaacaggtgacgcgccggccgtttgtacgcgccaccacc
ctgtcctggcagaaaaacatttattgcagctcgctgttcggcggcaactctcagtcaccg
gtcaacccggacgactacgtgaatggccggttgtggctgatgaatggcaaccccgtcacg
ccggataccgcgctgttggtctatcgactggtggaaggcgaccagggcgcgttcgcctcg
attgacagctaccacctcaccaacgccttacgcttgatcagccgttacgcccacctggtt
ttgcaagtcggcccccattggctcgatgccgacggcaaggtgcatgaccgcgcggtaccg
gaatttgccgtggcccatcatcatctggcgtccgagcgttatgactacagcgtcgaggcg
ggtatgccggagggggaaacctggcgttatatgcaggcccgctatccggcgttgttcagc
ctggtggtgttcttcggtgtactggccagcatccttgcgcattggctgcaaaaacgctcg
tccgccccgacccaggaattgcagcgtgcattgagtgccaacgaattcatcccgtatttc
cagccagtggtacgcggagacacgcgtcaatgggcaggctgtgaagtactgatgcgctgg
aaacacccgaaagagggcctggtgcggccggacctgtttattcccctggccgaagactcg
ggcctgatcgtgccgatgacccgcgccttgctgcgtcagaccgctgcgcaactggcgccc
cacgccgcgcgtttcagccccggcttccatattggcgtgaatatcaccgcgcgccattgc
caggacctggccctggtggaggattgccgggagttccttgccgccttcgcgcctggccag
gtcagcctggtgctggagctgaccgagcgcgagctgatcgagcccaccgatatcacccgc
cagctgttcgatgccctgcaccagctgggtgtactgatcgcgatcgatgactttggaaca
ggccattcgagcctggcttacttgcgcaacttcaacgtcgattacttgaagattgaccaa
agctttgtcgccatgatcggtgcggatgcgctgtcagggcatatcctggacagcatcata
gaactgtccggcaagctggaccttggcattgttgccgaaggcgtggaaacagcacaacag
tgtgaataccttgtcgcccaaggcgtggacttcttgcaaggttatctgttcggccgaccg
ttaccctgtgatgaattcattaattcgttgggcaacccgtga
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