Pseudomonas synxantha LBUM223: VO64_0544
Help
Entry
VO64_0544 CDS
T03769
Name
(GenBank) Cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb00260
Glycine, serine and threonine metabolism
pfb00270
Cysteine and methionine metabolism
pfb00450
Selenocompound metabolism
pfb00670
One carbon pool by folate
pfb01100
Metabolic pathways
pfb01110
Biosynthesis of secondary metabolites
pfb01230
Biosynthesis of amino acids
Module
pfb_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VO64_0544
00270 Cysteine and methionine metabolism
VO64_0544
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
VO64_0544
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VO64_0544
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfb04147
]
VO64_0544
Enzymes [BR:
pfb01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
VO64_0544
Exosome [BR:
pfb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VO64_0544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AKA81090
UniProt:
A0AAU8TEY7
LinkDB
All DBs
Position
624221..625387
Genome browser
AA seq
388 aa
AA seq
DB search
MSQPDKSAFATRVIHAGQSPDPTTGALMPPIYANSTYLQDSPGVHKGFDYGRSHNPTRFA
LERCVADLEGGSQAFAFASGLAAISTVLELLDAGAHIVSGNDLYGGTFRLFDKVRQRSAG
HRFSYVDLSDLSAFEASLQDDTRMVWVETPSNPLLSLTDLRAVARICRARGIVCVADNTF
ASPWIQRPLELGFDIVVHSTTKYLNGHSDVIGGIAVVGDNPELAERLGFLQNSVGAIAGP
FDAFLTLRGVKTLALRMERHCSNALDLATWLEQQPQVSRVHYPGLKSHPQHELAKQQMRG
FGGMISVDLNSDLAGATRFLENVKIFALAESLGGVESLIEHPAIMTHASIPAATRAQLGI
GDGLVRLSVGVEDVEDLRKDLAQALAHI
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcccgataaaagcgcgtttgccacccgtgtgatccatgccgggcagtcaccc
gacccgaccacgggcgcgctgatgccgccgatctacgccaactccacctacctgcaagac
agcccaggcgtgcacaagggcttcgactatgggcgctcccacaaccccacgcgttttgcc
ctggaacgctgcgtggccgaccttgaaggcggcagccaggcgtttgcgtttgcctcgggg
ctggcggcgatttccacggtgctggaactgctggatgccggcgcacatattgtctcgggt
aatgacttgtatggcggcacgttccggctgttcgacaaggtacgccagcgcagtgccggg
caccgtttcagctatgtcgacctgagcgacttgtcggcctttgaagcgtcgttgcaggac
gacacgcgcatggtctgggtcgagaccccgagcaatccgctgctgagcctcaccgacctg
cgcgccgtcgcacgtatctgccgtgcccgcgggattgtctgcgtggccgacaacaccttc
gccagcccgtggatccagcggccgctggaactgggtttcgatattgtggtgcactccact
accaagtacctgaatgggcattcggatgtgatcggtggtatcgccgttgtgggcgacaac
cctgagctggcagaacgcttgggctttctgcagaactcagtgggcgctattgccgggccg
ttcgacgcgtttctgaccttgcgcggggtaaagaccctggcgctgcgcatggagcgccat
tgcagcaatgccctggacctggccacctggctggaacaacagccacaggtatcgcgtgtt
cactacccaggcttgaaatcccacccacagcatgagttggcaaaacagcagatgcgcggg
tttggcgggatgatttcggtggatttgaacagcgacctggccggtgcaacgcgcttcctg
gaaaacgtcaagatcttcgccctggccgagagcctggggggcgtggaaagcctgatcgaa
cacccggcgatcatgacccatgcgagcatcccggcggcgacgcgggcgcagttgggaatc
ggcgatgggctggtacggttgtcggtgggggttgaggatgtagaggatctgcgcaaggat
ctggcccaagccctggcgcacatctaa
DBGET
integrated database retrieval system