Pseudomonas synxantha LBUM223: VO64_0567
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Entry
VO64_0567 CDS
T03769
Name
(GenBank) putative DNA-binding protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfb03000
]
VO64_0567
Transcription factors [BR:
pfb03000
]
Prokaryotic type
Helix-turn-helix
LacI family
VO64_0567
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
LacI
Peripla_BP_1
HTH_Tnp_ISL3
HTH_7
HTH_6
HTH_IclR
HTH_11
HTH_31
YdaS_toxin
AsnC_trans_reg
HTH_23
HTH_26
HTH_10
HTH_3
MarR
Motif
Other DBs
NCBI-ProteinID:
AKA81113
UniProt:
A0AAU8TTI8
LinkDB
All DBs
Position
complement(650982..652007)
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AA seq
341 aa
AA seq
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MLERAKHFSIKQLATQAGVSKATVDRVLHQRGSVHAQTRRRIEQALEELEAQEKNGLAVG
RTFHVDVIMHTPQRFSAAVQAAIVAQLASLAPFRIAPRFHLFEEIEPQAMYDQLLRCLHT
GSQGVVLKAADEPAVNQAVKQLIAAGIPVVTLVTDLPQSERIGYVGMDNRTAGQTAAYLM
SRWLPSQPQDVAVVIGSELFRGEEEREMGFRAWLRGRAEHLRVLDISGGYGVYERTFERV
TQALHQHPGLKAVYSVGGGNRAIVDAFAAQRRPLEVFIGHDLDEENRQLLREEKVAAIID
HNLQIDARHVFLHILQYHRLWKAGPIAPSQVQIVTPFNLPD
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacgcgcaaagcatttttccatcaagcaactcgccacccaggccggcgtcagt
aaggccacggtcgatcgcgtgttgcaccagcgtggcagcgtgcatgcgcagacccgtcgg
cgtatcgagcaggcgctggaggagttggaggcccaggaaaaaaacggcctggccgtgggg
cgcaccttccatgtggacgtcatcatgcacacgccccagcgtttcagcgcggcggtgcag
gcggcaatcgtggcgcagttggccagcctcgcgccatttcgcattgcgccgcgctttcac
ctgttcgaagaaatcgagccccaggccatgtacgaccaattgctgcgctgcctccacacg
ggcagccagggcgtggtgctcaaggccgccgatgagccggcggtgaaccaggcggtgaag
caactgattgccgccggcattccggtggtgaccttggtgacggacctgccccaaagcgaa
cgcatcggctatgtgggcatggacaatcgcactgccggccagaccgccgcctacctgatg
tcgcgctggctgcccagccagccccaggacgtggcggtggtgatcggcagtgaactattc
cgtggcgaagaagaacgcgagatgggctttcgcgcctggctgcgtggccgcgccgagcac
ttgcgggtgctggatatcagcggcggctatggcgtatacgagcgcacctttgagcgggtg
acccaagccttgcaccagcatcccgggctcaaggcggtttacagcgtcggcggcggcaac
cgtgcgatcgtcgatgcctttgccgcacagcgtcgcccattggaagtctttatcggccac
gacctcgacgaagaaaaccgccaactgctgagggaagaaaaagtcgcggcgatcatcgat
cacaacctgcagatcgatgcccgccacgtgttcctgcacatcctgcaataccaccggcta
tggaaggccgggccgattgcgccctcacaggtgcagatcgtcacgccgttcaacctgccg
gactga
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