Pseudomonas synxantha LBUM223: VO64_0624
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Entry
VO64_0624 CDS
T03769
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfb03400
]
VO64_0624
DNA repair and recombination proteins [BR:
pfb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VO64_0624
Archaeal homologous recombinant proteins
VO64_0624
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
STPRs
Motif
Other DBs
NCBI-ProteinID:
AKA81170
UniProt:
A0AAU8TEJ9
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Position
712644..713885
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AA seq
413 aa
AA seq
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MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLGQLNAQRPDVLLIAGDIFDTVNPPLKAQ
ERLYDFIISAHEQNPKLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDA
ERLLIPLPDAKGKIAAWCLALPFLRPAEVTGAQLGDDYLRGIGQVHEWLIAAANAKRKKG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFDRTVGYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYKHQVLDVMFQGERLVSVEPLLIPRSVNLQRLEAAPLAEILTQL
AALPDIDLLAETQRHPWLEVRVRLDEPQPDLRQQIETALQGKAVRLVRIAAEYAGQRGST
ETDDERLIELDQLTPQELFSRAWQDSYGSEVDEQTLKDFAVLLQEVQQAGEQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgttccacacctccgactggcacctgggccaaaacctccacggccaggaacgc
gacttcgaacatgcctgcttccttgagtggctgctgggccaactgaacgcccagcgcccg
gatgtgctgttgatcgccggcgatatcttcgacacggtcaacccgccgctcaaggcccag
gagcgtctgtatgacttcatcatcagcgcccacgaacaaaacccgaaactgaccatcgtg
atgatcgccggtaaccacgactccggttcgcgtatcgaattgcccgcaccactgatgcgc
cgcctgcgcacccatgccctgggccgggtgttgtggctggacgacggccaactggatgcc
gaacgcctgctgatccccttgccggatgccaaaggcaagatcgccgcgtggtgcctggca
ttgcccttcctgcgcccggcggaagtcaccggtgcacagctgggtgatgactacctgcgc
ggtatcggccaggtgcatgaatggctgatcgccgccgccaacgccaaacgcaagaaaggc
caggcgctgatagccatcagccatgcacatatggctggcggttcggtgtcggaagactcc
gagcgcagcctgatcatcggtaatgccgaggcgctgccggccagcctgttcgatagaact
gttggctatgttgcccttggccatttgcacaagccgcaaaaggtcaatggtgaagagcgt
attcgctatagcggttcgccgattccgctgtcgttttccgagatcggctacaagcaccag
gtactcgacgtgatgttccagggcgaacggctggtcagcgtcgaaccgctgctgattcca
cgctcggtcaacctgcaacgcttggaagccgcgcctctggccgagatcctcacgcaactg
gccgcgctgccggacatcgacctgctggccgaaacccagcgccacccgtggctggaagtg
cgcgtgcgccttgacgagccgcaacccgacctgcgccagcaaatcgaaaccgccctgcaa
ggcaaggccgtgcgcctggtgcgcatcgccgccgaatacgccggccagcgcggcagcacc
gaaaccgacgacgagcgcttgatcgaactcgaccagctcacgccccaggaactgttcagc
cgcgcctggcaggacagctatggcagcgaagtggatgaacagaccttgaaagacttcgcc
gtgctgctccaggaagtacaacaagcgggtgaacaaccatga
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