KEGG   Pseudomonas synxantha LBUM223: VO64_0624
Entry
VO64_0624         CDS       T03769                                 
Name
(GenBank) Exonuclease SbcD
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
pfb  Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:pfb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfb03400]
    VO64_0624
DNA repair and recombination proteins [BR:pfb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     VO64_0624
    Archaeal homologous recombinant proteins
     VO64_0624
SSDB
Motif
Pfam: SbcD_C Metallophos Metallophos_2 STPRs
Other DBs
NCBI-ProteinID: AKA81170
UniProt: A0AAU8TEJ9
LinkDB
Position
712644..713885
AA seq 413 aa
MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLGQLNAQRPDVLLIAGDIFDTVNPPLKAQ
ERLYDFIISAHEQNPKLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDA
ERLLIPLPDAKGKIAAWCLALPFLRPAEVTGAQLGDDYLRGIGQVHEWLIAAANAKRKKG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFDRTVGYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYKHQVLDVMFQGERLVSVEPLLIPRSVNLQRLEAAPLAEILTQL
AALPDIDLLAETQRHPWLEVRVRLDEPQPDLRQQIETALQGKAVRLVRIAAEYAGQRGST
ETDDERLIELDQLTPQELFSRAWQDSYGSEVDEQTLKDFAVLLQEVQQAGEQP
NT seq 1242 nt   +upstreamnt  +downstreamnt
ttgcgtctgttccacacctccgactggcacctgggccaaaacctccacggccaggaacgc
gacttcgaacatgcctgcttccttgagtggctgctgggccaactgaacgcccagcgcccg
gatgtgctgttgatcgccggcgatatcttcgacacggtcaacccgccgctcaaggcccag
gagcgtctgtatgacttcatcatcagcgcccacgaacaaaacccgaaactgaccatcgtg
atgatcgccggtaaccacgactccggttcgcgtatcgaattgcccgcaccactgatgcgc
cgcctgcgcacccatgccctgggccgggtgttgtggctggacgacggccaactggatgcc
gaacgcctgctgatccccttgccggatgccaaaggcaagatcgccgcgtggtgcctggca
ttgcccttcctgcgcccggcggaagtcaccggtgcacagctgggtgatgactacctgcgc
ggtatcggccaggtgcatgaatggctgatcgccgccgccaacgccaaacgcaagaaaggc
caggcgctgatagccatcagccatgcacatatggctggcggttcggtgtcggaagactcc
gagcgcagcctgatcatcggtaatgccgaggcgctgccggccagcctgttcgatagaact
gttggctatgttgcccttggccatttgcacaagccgcaaaaggtcaatggtgaagagcgt
attcgctatagcggttcgccgattccgctgtcgttttccgagatcggctacaagcaccag
gtactcgacgtgatgttccagggcgaacggctggtcagcgtcgaaccgctgctgattcca
cgctcggtcaacctgcaacgcttggaagccgcgcctctggccgagatcctcacgcaactg
gccgcgctgccggacatcgacctgctggccgaaacccagcgccacccgtggctggaagtg
cgcgtgcgccttgacgagccgcaacccgacctgcgccagcaaatcgaaaccgccctgcaa
ggcaaggccgtgcgcctggtgcgcatcgccgccgaatacgccggccagcgcggcagcacc
gaaaccgacgacgagcgcttgatcgaactcgaccagctcacgccccaggaactgttcagc
cgcgcctggcaggacagctatggcagcgaagtggatgaacagaccttgaaagacttcgcc
gtgctgctccaggaagtacaacaagcgggtgaacaaccatga

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