Pseudomonas synxantha LBUM223: VO64_0708
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Entry
VO64_0708 CDS
T03769
Name
(GenBank) Uncharacterized protein ImpC
KO
K11900
type VI secretion system protein ImpC
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
VO64_0708
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfb02044
]
VO64_0708
Secretion system [BR:
pfb02044
]
Type VI secretion system
Imp/Vas secretion system core components
VO64_0708
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
AKA81254
UniProt:
A0AAU8TGR5
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Position
complement(802167..803645)
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AA seq
492 aa
AA seq
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MTTIEHELQIVHTPGAGSILDNIIAQTLLSADDEAYGIAKRGVSAFIAELLKPHNREEPV
KKRLVDRMIAEIDTKLSQQMDEILHHPDFQALEASWRGLQLLVERTNFRENIKIELLNVS
RQDLLDDFEDSSEVTQSGLYKHVYSAEYGQFGGQPVGAIIADYFLSPSAPDVKLMRYASS
VASMAHAPFIAAAGPSFFGLESFTGLPDLKDLRDHFEGPQFAKWQSFRQSEDARYMGLTA
PRFLLRTPYDPLECPVKTFTYQENVVNSHEHYLWGNTAYAFATRLTDSFAHFRWCPNVIG
PQSGGAVEDLPLHHFQSMGEIETKIPTEVLISDRREYELAQEGFIALTMRKGSDNAAFFS
ASSVQKPKSFGTSEEGRAAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGAWKERTDLE
LELNKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVEGEPGWYRVNLSVRPHFKYMGAD
FTLSLVGKLDKA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgatcgaacacgaactgcaaatcgtacacaccccaggtgccggcagcatcctc
gataacatcattgcccagacattgctgagcgctgacgacgaggcctatggcattgccaag
cgcggtgtgtcggcgtttatcgcagagctgctcaagccgcataaccgcgaagaaccggtg
aagaaacgcctggttgaccggatgattgccgagatcgataccaagctcagccagcaaatg
gacgagatcctgcaccaccccgatttccaggcgctggaggcttcctggcgagggctgcag
ttgctggtcgagcgcacgaactttcgcgaaaacatcaagatcgagctgctgaatgtctcg
cgccaggacctgctggacgatttcgaggactcctcggaagtcactcagtccgggctctac
aagcatgtgtacagtgccgaatacggccagttcggcggccagccggtgggcgcgatcatt
gccgactactttctttctcccagtgcccctgatgtgaagctgatgcgatacgcatccagt
gtcgccagcatggcccacgcgccctttatcgctgccgcggggccgagtttctttggcctc
gaaagcttcaccgggctgccggacctgaaagacctgcgggatcatttcgaaggaccgcag
tttgccaagtggcaaagttttcgccagagcgaagacgcccgctacatgggcctcaccgca
ccgcgctttctgctacgcaccccgtacgacccccttgagtgcccggtcaagacctttacc
tatcaggagaacgtggtcaacagccacgagcactacctgtggggcaacaccgcctatgcc
tttgctacgcgcctgaccgacagtttcgcgcattttcgctggtgcccgaatgtcatcggc
ccgcaaagtggaggggccgtcgaggatcttccgctgcaccacttccagagcatgggagag
atagaaaccaagattcctaccgaggtactgatatcggaccggcgcgagtatgagctggca
caagaaggtttcatcgccctgaccatgcgcaagggtagcgataacgccgcgttcttctcc
gccagctcggtgcagaaacccaagtcctttggtaccagtgaagagggcagggctgcagag
ttgaattaccggctgggtacccagttgccctacatgatggtggtcaatcgcctggcccat
tacctcaaggtgctgcaacgcgagcaattgggggcgtggaaggagcgcacggacctggag
ctggaactcaataaatggattcgccagtacgtggcggaccaggaaaaccccagtgccgaa
gtgcgcgggcggcgcccattgcgtgctgcgcgcatcgtcgtcagcgatgtcgagggcgag
cctggctggtatcgggtcaacctgagcgtgcgcccgcatttcaaatacatgggggccgac
ttcaccttgtccctggtcggtaagctcgataaagcatga
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