Pseudomonas synxantha LBUM223: VO64_0814
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Entry
VO64_0814 CDS
T03769
Name
(GenBank) Rhs family protein
Organism
pfb
Pseudomonas synxantha LBUM223
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
TEN_YD-shell
TcdB_toxin_midN
Motif
Other DBs
NCBI-ProteinID:
AKA81360
UniProt:
A0AAU8TFT2
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All DBs
Position
922227..926972
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AA seq
1581 aa
AA seq
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MTHATHIAAIEHELDGFHQSLVEYRQQMGAWYSRALDSVSHAADMPSLLGMDRVLRVGDS
QRSVSLSDADFSTVARCPVGGVLKIESKFESAYDVPIGDIPVEVIGLDDGSSTRVMLDKH
GKGSHYCAAGGRYQVRVQGGVSAQQVDDLFTSYAGLTADLEQWLRSQWKSFKPHWESSTA
SAIGSGVLAGSWAAIHDVWDSIKLVQAMLEDPLKYVEQLGSEAAKLAQIATDAPKVMEQA
MLLASDEAALYLLLRTATIWLDALPPSEVAQAAASFMVSLLIDLVIGAVLTIALPAAGVA
YLSMRLVKYGKQILAAAVGFVEGVLAILTKFMQAVDRYKAVAVRGVVGGLKQGTMQMRWK
ARQNAVLKQKERVDDVPVVASNPKGDAAAPADKTVTHGCPVSMVTGEELLTLTDGALDGI
LPFEWTRLYRTSAVEVDCGLGFGWSHALAHRLVVSGESVVWTDHENRRTQFPLPTDSRPA
ITNSLAEAAIYLGSAPDELVLAQASRFYHFRDGVLVSISDAYDNRLRICRDHSGRIERLD
NGAGRSLLLRYELDRIVAVDYQVHRAKDRGPYVWETEQNVVSYAYDEDGRLVCATNAVGE
SERYRYDDQHVIVERQLAGGASFFWAWEGSGKAARCVRHWASFSQMDTRYAWGDDGRVTV
HNADGSQEVYVHDERARLVQRIDPDGAQHFKSYDKKGRLTVEQDPLGAVTAYQYDEAGRL
VALFPGEDEPTSYEHENGFVRIVRRGEAVWKYERNSQGDVTRRTDPDGQVTDYSYNKRGQ
LTGVWYPDHSCHRLVWNERGQLLEEQLPTGGIKRYRYDDLGRQVAREDEHGAQTLYEWDA
VGRLLKLTQPGGACRELSYNPYGKIIAERDELGHVTRYEYEGGLHLISRRLNADGTQVKY
RYDNVRLLLTEIENEVGETYQLAYHPNGLIQQETGFDGQRTAYVYDLNGNLLEKTEYGDD
DSTLVTRYERDHAGRLVRKTLPDGSVVDYAYDRQGNLLSVEDGHWALAYEYDRQNRLTAE
HQGWGTLRYGYNAYGQLQNLRLPDNNRLTFNHDKGGHLATVELNGALLTSHLFRAGREHQ
RQQGQLLSHYHYDDQHRLHAHAITQQESYLYQRQYDYDKSGNLTRLLDTRKGEHLYQYDP
LARLTRADHSQDVQERFAHNPAGNLLMQDRPGPDIVAANRLVIQGDRHYDYDAFGNLIRE
RRGKGKQLVTEYGYDCQHRLISVTKPNGETASYRYDPFGRRISKTVDGKTTEFFWQGDKL
IAEHHADRHRSYIYEPGSFRPLALLEGFGPKATTAYHYQLDHLGTPQELTTPEGEIVWSA
HYRAYGQIARLDVGKIDNPLRFQGQYFDQESGLHYNRHRYYNPDVGRYLTPDPVKLAGGI
NGYQYVPNPTGWVDPLGLSTCPGDECKPNAPPILPKPSVDEGAPALPQLARTQRQARIGE
LAEANAKQKVLDWEQKYDMHSVEKHGPEIPDNALRQRSIDGTNPTTGEREAVNSSSQFKT
WVMQLHAINKAMGRMQGDSPSPTGFDRRGNPVVIVELPGAGRGYKPNRRDVNDPKYIENM
DRAEVRFDRNNPTRPFTAFPK
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgccacccacatcgccgctatcgaacacgagctggatggtttccatcagagc
ctggtggagtaccgccagcagatgggcgcctggtattcgcgtgcgctggattcggtcagt
catgcagcggatatgccgtcgttgctgggcatggaccgggtgttacgggttggggattcc
cagcgttcggtaagccttagcgacgcggatttttctaccgtggcccgctgcccggtgggt
ggcgtgctgaagatcgagagcaaattcgaatcagcgtatgacgtgccgattggcgatatc
cctgtcgaggtgattggcctggatgacggcagttccacgcgggtgatgctcgataagcac
ggcaagggttcgcactactgcgccgccggcgggcgctatcaggtgcgggttcagggtggt
gtttcagcgcagcaagtggacgacttgtttacctcctatgccgggctgacggcggacttg
gaacagtggcttcggtcgcagtggaaaagcttcaaaccccactgggaaagctctactgcc
agcgcgattggcagcggcgtgctggcaggcagctgggcggcgatccatgacgtgtgggac
agcatcaagctggtgcaggcgatgcttgaagacccgttgaagtacgtcgaacaactgggc
agcgaggcggccaagttggcgcagatcgccaccgatgcgcccaaggtcatggagcaggcg
atgctgctggccagtgatgaagcggcgctgtacctgttactgcgcaccgccacgatctgg
ctggacgcgttaccgcccagtgaagttgcgcaggcagccgccagttttatggtgtcgctg
ctgattgatctggtgattggcgcagtgttgaccatcgcgttgccagcggcgggcgtggcg
tacttgagcatgcgcctggtcaagtacggcaagcagattcttgcggcggcagtgggcttc
gtggagggcgtgctggcgattctcacgaagttcatgcaggcggttgaccgttacaaagcg
gtggcggttcgcggggtggtcggcgggctgaagcaaggcacgatgcagatgcgctggaag
gcgcgacagaacgcggtgctgaagcagaaagagcgtgtggatgatgtgcctgtcgtggct
tcgaatcccaagggggatgcggcggcacctgcggacaagacggtcactcatggctgcccg
gtgtcgatggtcaccggggaggaattgctgaccctcaccgatggtgcgctggacgggatc
ttgccgtttgagtggacacgcttgtatcgcaccagtgcggtggaagtggattgtgggttg
gggtttggctggagtcatgcgctggcgcatcggcttgttgtgtcgggcgaatcggtggtg
tggacggaccatgagaatcgccgtacgcagtttccgttgcccaccgattctcgacccgcg
atcaccaatagcctggcggaagcggcgatctacctgggctcggcgcctgatgaactggtg
ttggcccaggcgtcgcggttttatcactttcgcgacggtgtgctggtttcgatcagtgat
gcgtatgacaaccgcctgcgcatttgccgtgatcattccgggcgaattgagcggttggat
aacggcgctggtcgctcactgttgctgcgctatgagctggatcgcatcgtcgcggtggat
taccaggttcatcgcgccaaagaccgtgggccctacgtctgggagaccgagcagaacgtc
gtttcctacgcctatgacgaagacggacgactggtttgcgcgaccaatgccgtaggggaa
agcgagcgttatcggtacgacgatcagcacgtcattgtcgagcggcagttggccggtggg
gcgagtttcttctgggcgtgggaaggctctggcaaggcggcacgctgtgtccggcattgg
gcgagtttttcgcagatggacacgcgttatgcctggggggatgacggtcgtgtcaccgtg
cataacgccgatggtagccaggaagtgtatgtccacgatgaacgggcgcggttggtacaa
cgcatcgatccggatggcgcccaacatttcaaatcctacgataaaaaaggccgactgacc
gtcgagcaagatccgctgggggcggtgacggcctatcagtacgacgaagccggacgcttg
gtggcgctgtttccgggggaggacgagccgacgtcctacgagcatgaaaatggctttgta
cggattgtcaggcgcggtgaagcggtctggaaatatgagcgtaacagccagggcgacgtt
acgcgtaggaccgatcctgacgggcaggtcacggactacagctacaacaaacgtgggcag
ttaaccggagtttggtatcccgatcacagctgtcatcggctggtatggaacgaacgtggg
cagttgcttgaggagcaattgcccactggcgggatcaagcgttatcgctatgacgatcta
gggcggcaggttgcgcgtgaggatgagcatggcgcgcagactctttatgaatgggacgcc
gttggacgtctgctgaaactgacccagcccggcggcgcttgccgggaattgagctacaac
ccctacggcaaaatcatcgccgagcgcgatgaactcggccacgtcacccgctacgaatac
gaaggcggcctgcacctgatcagtcgccgcctcaatgccgacggcacccaggtcaagtat
cgctacgacaacgttcgcttactgctgaccgaaatcgaaaacgaagtcggcgaaacctac
cagctcgcctaccaccccaacggcctgatccaacaggaaaccggcttcgacggccagcgc
accgcctacgtctacgacctcaacggtaacctgctggagaagacggaatacggtgacgat
gactctacgttggtcacccgctacgagcgcgaccacgccgggcgcctcgtccgaaaaacc
ctgcccgatggcagcgtggtcgattacgcctacgaccgccaaggcaaccttctcagcgtc
gaagacggccactgggccctggcctacgagtacgaccgccaaaaccgcctcaccgccgag
caccaaggctggggcaccttgcgctacggctacaacgcctacggccagctacaaaacctg
cgcctgccggacaataaccgcctcaccttcaaccacgacaaaggcggccacctcgccacg
gtggaattgaatggtgcgctgctgacttcgcatctcttccgcgccggtcgtgaacaccaa
cgccaacaaggtcagctgctcagccactaccactacgacgaccagcaccgcctgcacgcc
cacgccatcacacagcaggaaagttacctttaccaacgccagtacgactacgacaaatcc
ggcaacctcacccgcctgctcgacacgcgcaaaggcgaacacctttaccagtacgatccg
ctcgcccggctgacccgcgctgatcattcgcaggacgtccaggaacgcttcgcccacaac
ccggcgggcaacctgctcatgcaagaccgccccggcccggacatcgtcgcggcgaaccgc
ctggtgatccagggtgaccgtcactacgactacgacgccttcggcaacctgatccgcgaa
cgacgcggtaagggcaagcagctcgtcactgaatatggttacgactgccagcatcggctg
atcagcgtgacgaagcccaacggcgaaaccgccagttaccgctatgacccctttgggcgg
cgcatcagcaagaccgtagatggcaagaccacggagtttttctggcaaggcgacaagctg
attgccgaacatcacgcggaccgccaccgcagctacatctacgagcccggcagcttccgc
ccactggcactgctggaaggcttcggcccaaaagccacaacggcctaccactaccagctc
gaccacctcggcacaccgcaagaactcaccacgcccgaaggcgaaatcgtctggtccgcc
cactaccgcgcctacggccaaatcgcccggctcgacgtaggtaaaatcgataacccgctg
cgtttccagggtcaatacttcgatcaggaaagcgggctgcactacaaccgccatcgctac
tacaatccggatgttggtcgctacctgacgccggacccggtgaagttggcgggtgggatc
aatggttaccagtacgtgcccaatcctacgggatgggtggatccgctaggcttaagcacc
tgccctggtgacgaatgcaagcctaacgctcctcctatccttccgaagcctagcgtagat
gaaggcgcgcccgctttacctcaactggcgcgcactcagcgacaggcgagaataggtgaa
ctggcagaggcaaatgcaaaacaaaaagtactggattgggagcagaaatacgatatgcat
tcggttgaaaagcatgggccagagataccagacaacgctttaaggcaacgatctattgat
ggaacaaatccaaccacgggggagagagaagctgtcaattccagctctcaatttaaaacc
tgggtgatgcagcttcacgctataaataaagctatgggcagaatgcaaggcgattcacca
tctcctacaggttttgatagaagaggtaaccccgtggttatagtcgagctacccggagcc
ggacgaggctacaaacctaaccgccgggacgtaaacgatcctaagtatattgaaaatatg
gacagagcagaggtcagatttgatagaaacaatccaactcggccatttaccgcattcccg
aagtga
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