Pseudomonas synxantha LBUM223: VO64_0846
Help
Entry
VO64_0846 CDS
T03769
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfb03000
]
VO64_0846
Transcription factors [BR:
pfb03000
]
Prokaryotic type
Helix-turn-helix
Other families
VO64_0846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_30
AAA_5
nSTAND6
AAA_2
HTH_23
AAA_3
Mg_chelatase
AAA_16
HTH_7
AAA
HTH_22
AAA_7
HTH_20
HTH_psq
HTH_10
nSTAND3
HTH_Tnp_1
DUF2089
HTH_28
HTH_11
HTH_17
MCM
Motif
Other DBs
NCBI-ProteinID:
AKA81392
UniProt:
A0AAU8TFV6
LinkDB
All DBs
Position
959301..961121
Genome browser
AA seq
606 aa
AA seq
DB search
MAEPLAHDTLIQDSWRRCRAFGLDHQSAPSFDQLPAEGIRQLLESQHSLVQTTHQEVLPY
YENILSNSNCLIMLADNQGQVLTSWGTQRFIEPKLARGFSPGASWKERSSGTNAIGTALA
CAQAVHIEHDEHFLKANRFMTGSAAPIFDAQREIIAVLDVSSDSYLPPSHTLGMVKMMSQ
TVENRLILNLFRGEHFQLTFNTGLSNLDSQWAGLLIFDESGQVLSANRRADNLLGISLSR
VMIDRLFKVSLLELLNQPEGLPFSLQAAGRNRFQCLLKRPKQLPVQARVFNEPTPPPTPT
PINLKTLHFGDARVEKALRQAERLLEKDIPLLIHGETGVGKEVFVKALHHASSRSRQAFI
AVNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADKGTLFLDEIGDMPLPTQARL
LRVLQERCVQPVGSSEVFPVDLRIISATNRALRELVQAGRFREDLYYRIGGLTLELPPLR
ERTDKRALFQQLWQQHREPTQWAGLSAEVLGLFEQHPWPGNLRQVSSVLQVALAMAEEQP
IRAEHLPDDFFVDLKEAAPLSTRERLDDNLDLNQRLEAVGGNISHLARELGVSRNTLYKR
LRQHEG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacccctggctcacgacaccctaatccaggattcctggcgccgttgccgcgcc
tttggcctggatcaccagagcgctcccagctttgaccaactccccgccgaaggcattcgc
caactgttggagagccagcattcactggtgcagaccacccaccaggaagtgctgccctac
tacgagaacatcctcagcaattccaactgcctgatcatgctggccgacaaccagggccag
gtgctgacctcgtggggcacccagcgctttatcgagcccaagctggcccgtggtttcagc
cctggcgccagctggaaggagcgttccagcggcaccaatgccattggcaccgcgctggcc
tgcgcccaggcggtgcatatcgaacacgacgaacactttctcaaggccaaccgcttcatg
accggctcggcagcccccattttcgatgcacagcgcgaaatcatcgcggtgctggatgtg
tccagcgacagctacctgccgccctcccacaccctgggcatggtcaagatgatgagtcaa
accgtggaaaaccgactgatcctcaacctgttccgcggcgaacatttccaactgacgttc
aataccggcctgagcaatctcgacagccagtgggccggcctgttgatcttcgatgaaagc
ggccaggtgctgtcggccaaccggcgtgcggacaacctgctgggtatcagcctgtcgcgg
gtgatgatcgaccgtttgttcaaggtctcgctgctggagctgctcaaccagccggagggc
ctgccgttctcgttgcaggcggcgggacgcaatcggttccagtgcctgttgaagcggccc
aagcagctgccggtgcaagcccgggtgttcaatgaaccgacgccgccgccaaccccgacc
ccgatcaacctcaaaaccctgcattttggcgatgcacgggtggagaaagcactgcgccag
gccgagcgcctgctggaaaaggacattccgttgctgatccacggcgagaccggggtgggc
aaagaggtgttcgtcaaggccctgcatcacgctagttcccgcagccgccaggcgtttatc
gcggtgaactgtgcggcgattcccgctgagttggtggaatcggaactgttcggctatgaa
aaaggcgccttcaccggcgccaatcagaaaggcagcatcggcctgatccgcaaagcggac
aagggcacgctgttcctcgatgagattggcgatatgccattgccgacccaggcccggctg
ttgcgggtgttgcaagagcgctgcgtgcaaccggtgggcagcagcgaggtgttcccggtg
gacttgcgcatcatctcggcgaccaaccgggccctgcgtgagctggtgcaggccgggcgt
tttcgtgaggatttgtactaccgcatcggcggcctgaccctggagttgccgccgttgcgt
gagcgtaccgacaaacgggcgttgttccagcaactgtggcagcaacaccgcgagccgacc
cagtgggccgggctgagtgccgaggtgctggggttgttcgagcaacatccgtggccgggg
aatttgcgccaggtgagcagcgtgttacaggtggcgctggcaatggccgaagagcagccg
atccgtgcggagcatctgcccgatgattttttcgtcgatctaaaagaggcggcaccgctg
tctacacgcgagcgcctggacgacaacctggatctgaaccaacgccttgaggccgtgggc
ggaaatatttcccacctggcgcgggaactgggggtgagtcgcaacaccctgtacaaacgc
ctgcgccagcacgagggttga
DBGET
integrated database retrieval system
