Pseudomonas synxantha LBUM223: VO64_1267
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Entry
VO64_1267 CDS
T03769
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfb03016
]
VO64_1267
Enzymes [BR:
pfb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
VO64_1267
Transfer RNA biogenesis [BR:
pfb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VO64_1267
Prokaryotic type
VO64_1267
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
NttC
Motif
Other DBs
NCBI-ProteinID:
AKA81813
UniProt:
A0A0E3MKZ6
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All DBs
Position
complement(1405053..1405907)
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AA seq
284 aa
AA seq
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MANIDNAAAEMAAAGFYRIALGVEYKGSRYRGWQRQASGVPTVQETLENALSKVADSPVS
LMCAGRTDAGVHACGQVVHFDTQAERSMKAWVMGANINLPHDVSVSWAKVMPAHFHARFK
AIARRYRYVIYNDQIRPAHLNEEITWNHRPLDAERMAEAAQHLVGVHDFSAFRAGQCQAK
SPIKEVHHLRVTRHGKMIVLDIRAGAFLHHMVRNIAGVLMTIGTGERPVEWAKEVLESRI
RRTGGVTAHPFGLYLVDVEYRDEFQLPERFIGPHFLTGFSELGG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaatatagataacgcggccgccgaaatggcggccgcaggcttttaccgcatcgcc
ctgggcgtggaatacaaaggctcgcgctatcgcggctggcagcgccaggcttctggcgtg
ccaacggtgcaggaaaccctggaaaacgccctgtccaaagtcgctgattcgccggtgtcg
ctgatgtgtgccgggcgtaccgatgcgggtgtccacgcctgtgggcaggtggtgcatttc
gacacccaggccgagcgttcaatgaaggcatgggtgatgggcgccaatatcaatttgccc
catgacgtcagtgtgagctgggccaaggtcatgccggcgcactttcatgcacgcttcaag
gccatcgcccggcgttaccgctacgtgatctacaacgatcagatccgcccggcgcacctc
aacgaagaaatcacctggaaccatcgcccgctggatgccgagcgcatggccgaggccgcg
cagcatctggtgggtgtgcatgacttcagcgccttccgcgccggccagtgccaggccaag
tcgccaatcaaggaggtccaccacctgcgggtcacccggcacggcaagatgatcgtgctg
gatatccgcgccggggccttcctgcatcatatggtgcgcaacattgccggcgtactgatg
accatcggtaccggcgagcgcccggtggagtgggccaaggaagtgctggaaagccgcatt
cgtcgcacgggcggcgttacggcacatccgtttggcctgtatctggtggatgtggagtac
cgcgacgagttccaattgccggaacgctttatcggtccacacttcctcacaggtttcagc
gaacttggcggctga
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