Pseudomonas synxantha LBUM223: VO64_1283
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Entry
VO64_1283 CDS
T03769
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VO64_1283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfb03400
]
VO64_1283
DNA repair and recombination proteins [BR:
pfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VO64_1283
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VO64_1283
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
HAMP
AAA_22
AAA_30
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
AKA81829
UniProt:
A0A0E3K3S3
LinkDB
All DBs
Position
complement(1426521..1428536)
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AA seq
671 aa
AA seq
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MSDFQLVTRFEPAGDQPEAIRLMVEGIEAGLSHQTLLGVTGSGKTFSIANVIAQINRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLASLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLMGAIEGIKVELAERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRESGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAGRVIEQLVRPTGLVDPE
IEIRPALTQVDDLLSEINKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETQRRRDKQIAFNLENGIIPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQTRDE
IGKLRERLLTV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttccagctcgtcacccgttttgaacccgccggcgatcagccggaagccatt
cgcctgatggtcgaaggcatcgaggccggtctgtcccatcagacgctgctcggggtgacc
ggttcaggcaagaccttcagcatcgccaacgtgatcgcccagatcaaccgcccgaccctg
gtgctggcgccgaacaagaccctggccgcgcagctgtatggcgagttcaaggcgttcttc
ccgaacaacgcggtggagtacttcgtttcctactacgactactaccagcccgaagcctac
gtgccgtcctccgatacctttatcgagaaggatgcatcgatcaacgaccatatcgaacag
atgcggctgtcagcgaccaaggccttgctggagcgcaaggacgcgatcatcgtcaccacg
gtgtcgtgcatctacggcctgggcagcccggaaacctatctgaagatggtgctgcacgtc
gaccgcggcgacaaactcgaccagcgcgaactgctgcggcgcctggcgagcctgcagtac
acccgcaacgacatggacttcgcccgcgctacctttcgggtgcgcggcgatgtgatcgat
atctacccggcggaatccgacctggaagcgattcgcatcgagctgttcgacgatgaagtc
gaaagcctgtcggccttcgacccgttgaccggcgaagtgatccgcaagttgccacgcttc
acgttctacccgaaaagccactacgtgaccccgcgggaaaccctgatgggcgccatcgag
ggtatcaaggtcgagctggccgagcgcctggaatacctgcgttccaacaacaagctggtg
gaagcccagcgcctggagcagcgcacccgcttcgacctggagatgatcctggagctgggc
tactgcaacggcatcgaaaactactcgcgctacctttcgggtcgcgagtccggtgcgccg
ccgccaaccctctacgattaccttccgccggacgccttgctggtgatcgacgagtcccac
gtcagcgtgccgcaggtgggcgccatgtataagggcgaccgttcgcgtaaagagaccctg
gtggaatacggtttccgcctgccgtcggcactggacaaccgaccgatgcgcttcgatgaa
tgggaggccatcagcccgcagaccatctttgtgtccgccacgcccggtaactatgaagcc
gagcatgccggccgcgtcatcgagcagctggtgcgtccgactggcctggtggacccggaa
atcgaaatccgcccggcgctgacccaggtcgatgacttgctttcggagatcaacaagcgt
gtcgccctggaggagcgcgtattggtcaccaccctgaccaagcgtatgtccgaagacttg
accgactacctggccgaccatggcgtgcgcgtgcgctatctgcactcggacatcgacacc
gtggagcgggtagagattatccgcgacctgcgcctgggtaccttcgatgtgctggtgggg
atcaacctgctgcgcgaaggcctggacatgccggaagtgtcgctggtggcgattctggat
gcggacaaagagggcttcctgcgctcggaacgctctctgatccagaccatcggccgtgcg
gcgcgtaacctcaatggccgcgcgattctctacgcggaccgcattaccggctccatggag
cgggcgattggcgaaacccagcggcgtcgcgacaagcagatcgcgttcaacctggaaaac
ggcatcatccccaaaggcgtgttcaaggacgttgccgacatcatggaaggcgccaccgtg
cccggctcgcgcagcaagaagcgcaagggcatggccaaggccgccgaggaaagcgccaag
tacgagaacgaactgcgttcgccgagtgaaatcaccaagcgcattcgacaactggaagag
aagatgtaccagttggcgcgcgatcttgagttcgaggcggcggcacagacgcgcgatgag
attggcaagttgcgtgagcggttgctgacggtctga
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integrated database retrieval system
